Regulator LexA

GREs

GRE ID PSSM Score
eco_42 0.0000000000000000

Corems

Corem ID GRE pval
ec513877 eco_42 0.0001188684000
ec513894 eco_42 0.0000348273800
ec514975 eco_42 0.0001402717000
ec517532 eco_42 0.0000891716800
ec517583 eco_42 0.0001102723000
ec536158 eco_42 0.0000002269424
ec552642 eco_42 0.0000001685585
ec591443 eco_42 0.0000016181800
ec611935 eco_42 0.0000000000002
ec616317 eco_42 0.0001036708000

Genes

Gene name Common name Description Start Stop Strand Chromosome GRE pval
b0019 nhaA pH-dependent sodium/proton antiporter 17489 18655 + NC_000913.2 eco_42 0.0000000020561
b0060 polB DNA polymerase 65780 63429 - NC_000913.2 eco_42 0.0000000000000
b0225 yafQ predicted toxin of the YafQ-DinJ toxin-antitoxin system 246239 245961 - NC_000913.2 eco_42 0.0000000000000
b0226 dinJ predicted antitoxin of YafQ-DinJ toxin-antitoxin system 246502 246242 - NC_000913.2 eco_42 0.0000000000000
b0231 dinB DNA polymerase IV 250898 251953 + NC_000913.2 eco_42 0.0000000000000
b0232 yafN predicted antitoxin of the YafO-YafN toxin-antitoxin system 252005 252298 + NC_000913.2 eco_42 0.0000000001086
b0236 prfH peptide chain release factor 2 253702 254202 + NC_000913.2 eco_42 0.0001956015000
b0338 cynR DNA-binding transcriptional dual regulator 357914 357015 - NC_000913.2 eco_42 0.0016791930000
b0457 ylaB orf, hypothetical protein 477841 476291 - NC_000913.2 eco_42 0.0000000002675
b0561 tfaD orf, hypothetical protein 580883 581320 + NC_000913.2 eco_42 0.0000335735000
b0662 ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 694324 695499 + NC_000913.2 eco_42 0.0000086760480
b0779 uvrB excinuclease ABC subun 812749 814770 + NC_000913.2 eco_42 0.0000000000000
b0799 dinG ATP-dependent DNA helicase 832293 834443 + NC_000913.2 eco_42 0.0000000000093
b0806 ybiM orf, hypothetical protein 841279 841019 - NC_000913.2 eco_42 0.0000391403100
b0958 sulA SOS cell division inhibitor 1020142 1019633 - NC_000913.2 eco_42 0.0000000000000
b1021 ycdP predicted inner membrane protein 1085742 1085329 - NC_000913.2 eco_42 0.0000000003877
b1024 ycdS predicted outer membrane protein 1091512 1089089 - NC_000913.2 eco_42 0.0000000772750
b1045 ymdB hypothetical protein 1105043 1105576 + NC_000913.2 eco_42 0.0000146931300
b1183 umuD DNA polymerase V, subunit D 1229990 1230409 + NC_000913.2 eco_42 0.0000000000000
b1184 umuC DNA polymerase V subunit Umu 1230409 1231677 + NC_000913.2 eco_42 0.0000000000000
b1250 kch voltage-gated potassium channe 1308293 1307040 - NC_000913.2 eco_42 0.0000017375400
b1571 ydfA Qin prophage; predicted protein 1646532 1646687 + NC_000913.2 eco_42 0.0000094955740
b1598 ydgD predicted peptidase 1669984 1670805 + NC_000913.2 eco_42 0.0000976369700
b1673 ydhV predicted oxidoreductase 1751854 1749752 - NC_000913.2 eco_42 0.0000094955740
b1728 ydjM predicted inner membrane protein regulated by LexA 1808235 1808825 + NC_000913.2 eco_42 0.0000008849528
b1741 ydjQ endonuclease of nucleotide excision repair 1821539 1822426 + NC_000913.2 eco_42 0.0000035658830
b1815 b1815 orf, hypothetical protein 1896451 1898049 + NC_000913.2 eco_42 0.0000000368828
b1847 yebF predicted protein 1928414 1928058 - NC_000913.2 eco_42 0.0000000000000
b1848 yebG conserved protein regulated by LexA 1928771 1928481 - NC_000913.2 eco_42 0.0000000076856
b1849 purT phosphoribosylglycinamide formyltransferase 2 1928905 1930083 + NC_000913.2 eco_42 0.0000000002477
b1860 ruvB Holliday junction DNA helicase 1943380 1942370 - NC_000913.2 eco_42 0.0000000000000
b1952 dsrB hypothetical protein 2022847 2022659 - NC_000913.2 eco_42 0.0000856670300
b2009 sbmC DNA gyrase inhibitor 2079286 2078813 - NC_000913.2 eco_42 0.0000000001561
b2118 yehI hypothetical protein 2198301 2201933 + NC_000913.2 eco_42 0.0000591703600
b2212 alkB oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions 2307363 2306713 - NC_000913.2 eco_42 0.0000000010178
b2377 yfdY predicted inner membrane protein 2493314 2493072 - NC_000913.2 eco_42 0.0000112605600
b2504 yfgG hypothetical protein 2627312 2627503 + NC_000913.2 eco_42 0.0000094955740
b2616 recN recombination and repair protein 2749817 2751478 + NC_000913.2 eco_42 0.0000000000000
b2698 recX RecA regulator RecX 2820661 2820161 - NC_000913.2 eco_42 0.0000000000040
b2699 recA recombinase A 2821791 2820730 - NC_000913.2 eco_42 0.0000212081200
b2899 yqfA predicted oxidoreductase, inner membrane subun 3041170 3040511 - NC_000913.2 eco_42 0.0000230892100
b3026 qseC sensory histidine kinase in two-component regulatory system with Qse 3168506 3169855 + NC_000913.2 eco_42 0.0000051782180
b3068 ygjF G/U mismatch-specific DNA glycosylase 3213495 3212989 - NC_000913.2 eco_42 0.0000000255867
b3645 dinD DNA-damage-inducible protein 3815783 3816607 + NC_000913.2 eco_42 0.0000000000000
b3813 uvrD DNA-dependent ATPase I and helicase 3996006 3998168 + NC_000913.2 eco_42 0.0000000003784
b3828 metR DNA-binding transcriptional activator, homocysteine-binding 4010839 4009886 - NC_000913.2 eco_42 0.0000288446200
b3832 rmuC predicted recombination limiting protein 4015356 4016783 + NC_000913.2 eco_42 0.0000032729200
b3861 yihF putative GTP-binding protein 4042222 4043652 + NC_000913.2 eco_42 0.0001677544000
b4043 lexA LexA repressor 4255138 4255746 + NC_000913.2 eco_42 0.0000000000000
b4044 dinF DNA-damage-inducible SOS response protein 4255765 4257144 + NC_000913.2 eco_42 0.0000001238069
b4057 yjbR hypothetical protein 4268681 4269037 + NC_000913.2 eco_42 0.0000051782180
b4058 uvrA excinuclease ABC subunit A 4271894 4269072 - NC_000913.2 eco_42 0.0000000000000
b4078 yjcO hypothetical protein 4295148 4294459 - NC_000913.2 eco_42 0.0000044986920
b4125 dcuS sensory histidine kinase in two-component regulatory system with DcuR, regulator of anaerobic fumarate respiration 4349685 4348054 - NC_000913.2 eco_42 0.0000059179630
b4347 yjiW conserved protein 4577863 4577522 - NC_000913.2 eco_42 0.0000629705700
b4396 rob DNA-binding transcriptional activator 4633333 4632464 - NC_000913.2 eco_42 0.0000000000000
b4399 creC sensory histidine kinase in two-component regulatory system with CreB or PhoB, regulator of the CreBC regulon 4634719 4636143 + NC_000913.2 eco_42 0.0000144835800

Conditions

Condition ID Condition Name GRE pval
eco_101 GSM118615 40 0.0352336500000
eco_104 GSM120192 40 0.0387015900000
eco_106 GSM1371 40 0.0309955000000
eco_108 GSM1373 40 0.0243899600000
eco_113 GSM18251 40 0.0197443500000
eco_121 GSM18264 40 0.0277637200000
eco_124 GSM18285 40 0.0040780990000
eco_126 GSM30817 40 0.0492866500000
eco_128 GSM30821 40 0.0322894800000
eco_136 GSM38547 40 0.0036345730000
eco_144 GSM65590 40 0.0049539250000
eco_147 GSM65630 40 0.0342141400000
eco_148 GSM65641 40 0.0246440900000
eco_155 GSM73139 40 0.0438308800000
eco_16 Clean_DIAUX12 40 0.0053731370000
eco_17 Clean_DIAUX13 40 0.0017917480000
eco_170 GSM73263 40 0.0366656100000
eco_171 GSM73264 40 0.0184307800000
eco_172 GSM73265 40 0.0201890900000
eco_175 GSM73272 40 0.0395585700000
eco_178 GSM73283 40 0.0038065230000
eco_179 GSM73285 40 0.0193977300000
eco_18 Clean_DIAUX3 40 0.0405218400000
eco_185 GSM77354 40 0.0014905740000
eco_188 GSM8116 40 0.0184113500000
eco_193 GSM82548 40 0.0065808830000
eco_205 GSM83077 40 0.0403429000000
eco_206 GSM83078 40 0.0272479100000
eco_219 GSM99103 40 0.0000001972857
eco_22 Clean_H2O22 40 0.0142960300000
eco_227 GSM99122 40 0.0116064400000
eco_228 GSM99128 40 0.0004446037000
eco_232 GSM99136 40 0.0043046550000
eco_239 GSM99173 40 0.0001659925000
eco_24 Clean_H2O27 40 0.0332131300000
eco_246 GSM99197 40 0.0243965000000
eco_255 GSM99396 40 0.0360441200000
eco_258 1277 40 0.0002292936000
eco_260 1592 40 0.0013926970000
eco_261 1595 40 0.0434400200000
eco_262 1638 40 0.0086502980000
eco_263 1639 40 0.0039145310000
eco_266 5265 40 0.0332688400000
eco_267 5278 40 0.0086985980000
eco_268 5284 40 0.0033331630000
eco_274 Clean_H2O26 40 0.0028483110000
eco_275 Clean_H2O28 40 0.0083278710000
eco_28 Clean_TGC2 40 0.0253764200000
eco_280 EC_GLY_GLYA_20_B 40 0.0173137200000
eco_282 EC_GLY_GLYE_20_A 40 0.0048701440000
eco_287 EC_LAC_LB_20_C 40 0.0058535130000
eco_3 1593 40 0.0000144526400
eco_300 GADXW_exp8 40 0.0007430410000
eco_301 GADXW_exp9 40 0.0189338600000
eco_303 GSM101235 40 0.0096639970000
eco_305 GSM101241 40 0.0470824400000
eco_306 GSM101242 40 0.0381624100000
eco_325 GSM118621 40 0.0190754200000
eco_338 GSM18283 40 0.0121918800000
eco_343 GSM38549 40 0.0163449100000
eco_35 EC_GLY_GLYA_20_A 40 0.0455240000000
eco_350 GSM73120 40 0.0499062300000
eco_353 GSM73137 40 0.0025004790000
eco_359 GSM73269 40 0.0291614800000
eco_36 EC_GLY_GLYA_20_C 40 0.0014909860000
eco_360 GSM73273 40 0.0050130000000
eco_371 GSM82552 40 0.0346453800000
eco_373 GSM82598 40 0.0116026000000
eco_379 GSM83073 40 0.0205473400000
eco_384 GSM94005 40 0.0010808080000
eco_386 GSM98731 40 0.0262147400000
eco_388 GSM99089 40 0.0103773200000
eco_389 GSM99098 40 0.0450517700000
eco_390 GSM99101 40 0.0237645900000
eco_396 GSM99143 40 0.0006736563000
eco_397 GSM99145 40 0.0108053400000
eco_398 GSM99148 40 0.0089871550000
eco_4 1597 40 0.0013834210000
eco_403 GSM99172 40 0.0012471850000
eco_411 GSM99208 40 0.0353000300000
eco_413 GSM99391 40 0.0391159000000
eco_416 1290 40 0.0185804900000
eco_417 14829 40 0.0066397590000
eco_419 1637 40 0.0042617310000
eco_423 9395 40 0.0243415100000
eco_424 Clean_ANA2 40 0.0150644000000
eco_425 Clean_TGC12 40 0.0033061750000
eco_427 Clean_TGC6 40 0.0145042900000
eco_432 EC_GLY_GLYC_44_C 40 0.0335226500000
eco_433 EC_LAC_L3_20_C 40 0.0001405457000
eco_434 EC_LAC_LA_60_B 40 0.0116482400000
eco_435 EC_LAC_LC_20_C 40 0.0226715600000
eco_439 GADXW_exp1 40 0.0045536580000
eco_44 EC_LAC_L2_20_C 40 0.0009744638000
eco_441 GADXW_exp14 40 0.0072164985000
eco_442 GADXW_exp15 40 0.0055808070000
eco_443 GADXW_exp16 40 0.0005165093000
eco_447 GSM106342 40 0.0257313000000
eco_45 EC_LAC_L2_60_B 40 0.0002798282000
eco_46 EC_LAC_L2_60_C 40 0.0162530400000
eco_467 GSM37074 40 0.0135338300000
eco_473 GSM65588 40 0.0146462400000
eco_474 GSM65594 40 0.0089183600000
eco_480 GSM67659 40 0.0306440900000
eco_481 GSM73119 40 0.0165410700000
eco_482 GSM73123 40 0.0195488300000
eco_487 GSM73268 40 0.0340880600000
eco_488 GSM73279 40 0.0050104370000
eco_489 GSM73282 40 0.0013024010000
eco_49 EC_LAC_LA_60_D 40 0.0289806900000
eco_490 GSM73290 40 0.0227908000000
eco_492 GSM77348 40 0.0088755250000
eco_494 GSM77355 40 0.0134701000000
eco_496 GSM82600 40 0.0139619400000
eco_507 GSM99088 40 0.0068936910000
eco_511 GSM99104 40 0.0335508500000
eco_520 GSM99198 40 0.0044302410000
eco_523 GSM99389 40 0.0234468900000
eco_524 GSM99394 40 0.0155778200000
eco_527 wt 40 0.0433859400000
eco_530 14830 40 0.0051746280000
eco_533 1916 40 0.0044008580000
eco_534 Clean_DIAUX10 40 0.0260882000000
eco_535 Clean_DIAUX5 40 0.0063184740000
eco_538 crp 40 0.0398968300000
eco_539 crpcysB__G 40 0.0152272300000
eco_541 crpfur__G 40 0.0382346400000
eco_549 EC_LAC_L2_20_B 40 0.0140631700000
eco_550 EC_LAC_L2_60_A 40 0.0224116400000
eco_551 EC_LAC_LA_60_C 40 0.0401701800000
eco_554 EC_LAC_LD_20_A 40 0.0080347020000
eco_555 EC_LAC_LD_60_A 40 0.0320160900000
eco_558 E-MEXP-267-raw-data-495080223.txt 40 0.0355932800000
eco_560 E-MEXP-267-raw-data-495080303.txt 40 0.0022651150000
eco_562 GADXW_exp12 40 0.0053499620000
eco_563 GSM101778 40 0.0366004300000
eco_564 GSM101780 40 0.0357927500000
eco_57 EC_LAC_WILD_E 40 0.0495003700000
eco_573 GSM137282 40 0.0150918200000
eco_58 EC_LAC_WILD_F 40 0.0477283700000
eco_584 GSM73121 40 0.0205129700000
eco_599 GSM94003 40 0.0146993800000
eco_604 GSM99123 40 0.0002618829000
eco_608 GSM99151 40 0.0137523300000
eco_610 GSM99174 40 0.0079849030000
eco_616 1278 40 0.0083122630000
eco_617 1641 40 0.0000472203600
eco_618 1642 40 0.0487719400000
eco_623 Clean_H2O21 40 0.0091060350000
eco_624 Clean_TGC1 40 0.0000234928900
eco_625 EC_GLY_GLY1_44_C 40 0.0419491400000
eco_627 EC_GLY_GLY2_44_B 40 0.0407775600000
eco_628 EC_GLY_GLYB_20_A 40 0.0049063590000
eco_629 EC_GLY_GLYC_20_A 40 0.0103675700000
eco_631 EC_GLY_GLYE_44_A 40 0.0049163360000
eco_632 EC_GLY_WILD_B 40 0.0377358100000
eco_633 EC_GLY_WILD_E 40 0.0014839790000
eco_634 EC_LAC_L2_20_A 40 0.0168063400000
eco_635 EC_LAC_L3_20_B 40 0.0094287010000
eco_636 EC_LAC_L3_60_B 40 0.0220506700000
eco_640 EC_LAC_LE_60_B 40 0.0139201100000
eco_648 GSM118606 40 0.0286040900000
eco_649 GSM118610 40 0.0079983240000
eco_651 GSM18236 40 0.0184412300000
eco_654 GSM18276 40 0.0041614170000
eco_66 E-MEXP-245-raw-data-396455381.txt 40 0.0377723800000
eco_672 GSM73148 40 0.0269446300000
eco_692 GSM99097 40 0.0424907600000
eco_695 GSM99115 40 0.0421700800000
eco_7 5268 40 0.0100671100000
eco_70 GADXW_exp13 40 0.0231625800000
eco_703 GSM99216 40 0.0077061120000
eco_705 GSM99397 40 0.0125867100000
eco_708 Clean_ANA9 40 0.0056588070000
eco_709 Clean_H2O29 40 0.0067756650000
eco_71 GADXW_exp6 40 0.0334277200000
eco_710 crpfruR 40 0.0190509600000
eco_711 EC_GLY_GLYE_20_C 40 0.0273412400000
eco_713 EC_LAC_LD_20_C 40 0.0398316300000
eco_717 GADXW_exp4 40 0.0036657020000
eco_718 GSM118608 40 0.0329943200000
eco_719 GSM120196 40 0.0014342280000
eco_720 GSM1369 40 0.0007029540000
eco_721 GSM18265 40 0.0154499700000
eco_731 GSM67660 40 0.0073398850000
eco_734 GSM73252 40 0.0455532800000
eco_741 GSM89486 40 0.0280477300000
eco_742 GSM94004 40 0.0025131300000
eco_753 5281 40 0.0025293160000
eco_754 Clean_ANA17 40 0.0173479100000
eco_755 Clean_DIAUX2 40 0.0381150600000
eco_757 EC_GLY_GLYC_44_B 40 0.0346659000000
eco_758 EC_GLY_GLYD_44_C 40 0.0435392300000
eco_762 GADXW_exp10 40 0.0073375940000
eco_763 GADXW_exp5 40 0.0355899800000
eco_764 GSM101243 40 0.0097997870000
eco_766 GSM116031 40 0.0383481600000
eco_769 GSM18282 40 0.0390817800000
eco_77 GSM101240 40 0.0370656400000
eco_770 GSM37073 40 0.0140571000000
eco_776 GSM77342 40 0.0284329200000
eco_779 GSM99127 40 0.0162257200000
eco_780 GSM99147 40 0.0418124800000
eco_781 GSM99185 40 0.0002150262000
eco_786 EC_LAC_WILD_C 40 0.0126175700000
eco_79 GSM101771 40 0.0393085500000
eco_799 GSM73259 40 0.0027817640000
eco_800 GSM73284 40 0.0329336300000
eco_807 GSM99636 40 0.0293389400000
eco_808 GSM99638 40 0.0332776100000
eco_810 5272 40 0.0029585850000
eco_815 GSM101770 40 0.0487321900000
eco_816 GSM106755 40 0.0237181300000
eco_82 GSM106337 40 0.0028546100000
eco_822 GSM99154 40 0.0059545770000
eco_825 GADXW_exp3 40 0.0129486300000
eco_827 GSM65591 40 0.0203705900000
eco_830 GSM99106 40 0.0003971246000
eco_838 GSM114615 40 0.0313066800000
eco_839 GSM1370 40 0.0433472000000
eco_847 GSM73135 40 0.0465542700000
eco_848 GSM99639 40 0.0218958500000
eco_851 GSM99112 40 0.0008449869000
eco_852 GSM99156 40 0.0004325756000
eco_856 Clean_ANA20 40 0.0318605500000
eco_860 GSM82549 40 0.0215815400000
eco_861 GSM99124 40 0.0300604100000
eco_863 GSM73118 40 0.0012954100000
eco_87 GSM111415 40 0.0008683370000
eco_9 5287 40 0.0081433300000