hal_10154 Co-expression

Genes in hal_10154

Organism Gene name Common name Accession Description Start Stop Strand Chromosome
Halobacterium salinarum sp. NRC-1 VNG0099G rpl10e NP_279248.1 50S ribosomal protein L10E 84415 83885 - NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG0237H VNG0237H NP_279357.1 Vng0237h 197186 197052 - NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG0239C VNG0239C NP_279358.1 Vng0239c 197512 197195 - NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG0548C VNG0548C NP_279589.1 Vng0548c 422844 422662 - NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG0549G eif2a NP_279590.1 translation initiation factor eIF-2 subunit alpha 423647 422844 - NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG0550G rps27e NP_279591.1 30S ribosomal protein S27E 423817 423644 - NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG0551G rpl44e NP_279592.1 50S ribosomal protein L44E 424007 423822 - NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG1157G rphs6 NP_280057.1 30S ribosomal protein S14P 876667 877029 + NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG1158G rps28e NP_280058.2 30S ribosomal protein S28e 877036 877260 + NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG1159G rpl24e NP_280059.1 50S ribosomal protein L24E 877260 877448 + NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG1160G ndk NP_280060.1 nucleoside diphosphate kinase 877445 877930 + NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG2648G rps10p NP_281201.1 30S ribosomal protein S10P 1984709 1984401 - NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG2649G eef1a NP_281202.1 translation elongation factor eEF-1A subunit alpha 1985978 1984713 - NC_002607.1

Conditions in hal_10154

Condition ID Condition Name
hal_1020 troR_0min_-EDTA_CM_vs_NRC1-h1.sig
hal_1023 troR_60min_-EDTA_CM_vs_NRC1-h1.sig
hal_1045 KO_1237.2_0.3619_vs_NRC-1_h1.sig
hal_109 circadian_drk6_cycling_0000min_vs_NRC-1e.sig
hal_111 circadian_drk6_cycling_0360min_vs_NRC-1e.sig
hal_112 circadian_drk6_cycling_0540min_vs_NRC-1e.sig
hal_1129 gamma2__0000gy-0000m
hal_113 circadian_drk6_cycling_0720min_vs_NRC-1e.sig
hal_1131 gamma2__0000gy-0020m
hal_114 circadian_drk6_cycling_0912min_vs_NRC-1e.sig
hal_1147 20061006_Cmyc_tfbE_rep2_0.169_vs_NRC-1e
hal_1148 20061006_Cmyc_tfbE_rep2_0.439_vs_NRC-1e
hal_1149 20061006_Cmyc_tfbE_rep2_0.877_vs_NRC-1e
hal_115 circadian_drk6_cycling_1080min_vs_NRC-1e.sig
hal_116 circadian_drk6_cycling_1260min_vs_NRC-1e.sig
hal_117 circadian_drk6_cycling_1440min_vs_NRC-1e.sig
hal_1217 20060717_Cmyc_tbpD_rep1_0.416_vs_NRC-1d.sig
hal_1218 20060717_Cmyc_tbpD_rep1_0.836_vs_NRC-1d.sig
hal_1229 20060717_Cmyc_tbpB_rep1_0.431_vs_NRC-1e.sig
hal_1230 20060717_Cmyc_tbpB_rep1_0.812_vs_NRC-1e.sig
hal_1237 20060717_Cmyc_rep2_0.223_vs_NRC-1e.sig
hal_1238 20060717_Cmyc_rep2_0.407_vs_NRC-1e.sig
hal_1239 20060717_Cmyc_rep2_0.883_vs_NRC-1e.sig
hal_127 circadian_20051021_cycling_dark_42oC_1440min_vs_NRC-1d.sig
hal_1276 20060308_KO_tbpA_rep1_0.398_vs_NRC-1e.sig
hal_1279 Cmy_cspD2_1_mOD_vs_NRC-1d.sig
hal_1281 Cmy_cspD2_2_mOD_vs_NRC-1d.sig
hal_1283 Cmy_cspD1_1_mOD_vs_NRC-1d.sig
hal_1284 Cmy_cspD1_2_hOD_vs_NRC-1d.sig
hal_1285 Cmy_cspD1_2_mOD_vs_NRC-1d.sig
hal_129 circadian_20051021_cycling_dark_42oC_1800min_vs_NRC-1d.sig
hal_1298 20050726_Cmyc_tfbC_rep1_0.132_vs_NRC-1d.sig
hal_130 circadian_20051021_cycling_dark_42oC_1985min_vs_NRC-1d.sig
hal_1300 20050726_Cmyc_tfbC_rep1_0.857_vs_NRC-1d.sig
hal_1301 20050726_Cmyc_tfbC_rep1_1.080_vs_NRC-1d.sig
hal_1314 20050726_Cmyc_tfbA_rep1_0.141_vs_NRC-1d.sig
hal_1316 20050726_Cmyc_tfbA_rep1_0.908_vs_NRC-1d.sig
hal_1317 20050726_Cmyc_tfbA_rep1_0.983_vs_NRC-1d.sig
hal_132 circadian_20051021_cycling_dark_42oC_2340min_vs_NRC-1d.sig
hal_134 circadian_20051021_cycling_dark_42oC_2705min_vs_NRC-1d.sig
hal_135 circadian_20051021_cycling_dark_42oC_2880min_vs_NRC-1d.sig
hal_1352 H2O2_Recov._set_1_0mM_030min_vs_NRC-1d.sig
hal_1353 H2O2_Recov._set_1_0mM_040min_vs_NRC-1d.sig
hal_1354 H2O2_Recov._set_1_0mM_050min_vs_NRC-1d.sig
hal_1356 H2O2_Recov._set_1_0mM_120min_vs_NRC-1d.sig
hal_1369 KO_asnC_0.1774_vs_NRC-1h1.sig
hal_1371 KO_asnC_0.6051_vs_NRC-1h1.sig
hal_1372 KO_asnC_1.3076_vs_NRC-1h1.sig
hal_1385 KO_trh4.2_0.1729_vs_NRC-1_h1.sig
hal_1387 KO_trh4.2_0.4373_vs_NRC-1_h1.sig
hal_1388 KO_trh4.2_0.5434_vs_NRC-1_h1.sig
hal_1395 KO_trh3.2_0.5673_vs_NRC-1_h1.sig
hal_1396 KO_trh3.2_1.3887_vs_NRC-1_h1.sig
hal_1399 NRC-1_0.3882_vs_NRC-1_h1.sig
hal_1400 NRC-1_1.0338_vs_NRC-1_h1.sig
hal_1440 sDura3D1179_pCu_d1.000mM_t-015m_vs_NRC-1h1.sig
hal_1466 sDura3_pCu_d0.700mM_t+015m_vs_NRC-1h1.sig
hal_205 Circadian_Dark9_Control_0000min_vs_NRC-1g.sig
hal_206 Circadian_Dark9_Control_0180min_vs_NRC-1g.sig
hal_207 Circadian_Dark9_Control_0360min_vs_NRC-1g.sig
hal_209 Circadian_Dark9_Control_0720min_vs_NRC-1g.sig
hal_210 Circadian_Dark9_Control_1080min_vs_NRC-1g.sig
hal_211 Circadian_Dark9_Control_1265min_vs_NRC-1g.sig
hal_212 Circadian_Dark9_Control_1440min_vs_NRC-1g.sig
hal_213 Circadian_Dark9_Control_1620min_vs_NRC-1g.sig
hal_214 Circadian_Dark9_Control_1800min_vs_NRC-1g.sig
hal_215 Circadian_Dark9_Control_1980min_vs_NRC-1g.sig
hal_216 Circadian_Dark9_Control_2160min_vs_NRC-1g.sig
hal_217 Circadian_Dark9_Control_2340min_vs_NRC-1g.sig
hal_218 Circadian_Dark9_Control_2520min_vs_NRC-1g.sig
hal_220 Circadian_Dark9_Control_2880min_vs_NRC-1g.sig
hal_221 Circadian_Dark9_Control_3060min_vs_NRC-1g.sig
hal_222 Circadian_Dark9_Control_3240min_vs_NRC-1g.sig
hal_223 Circadian_Dark9_Control_3420min_vs_NRC-1g.sig
hal_224 Circadian_Dark9_Control_3600min_vs_NRC-1g.sig
hal_225 Circadian_Dark9_Control_3780min_vs_NRC-1g.sig
hal_226 Circadian_Dark9_Control_3960min_vs_NRC-1g.sig
hal_227 Circadian_Dark9_Control_4140min_vs_NRC-1g.sig
hal_228 Circadian_Dark9_Control_4320min_vs_NRC-1g.sig
hal_229 Circadian_Dark9_Control_4500min_vs_NRC-1g.sig
hal_328 Cu_ura3_KO_set1_-030min_vs_NRC-1h1.sig
hal_332 Cu_ura3_KO_set1_020min_vs_NRC-1h1.sig
hal_390 Cu_vng1179_set2_080min_vs_NRC-1h1.sig
hal_442 idr1_60_min_-Fe_vs_NRC1-h1.sig
hal_457 ura3_40min_+Fe_vs_NRC1-h1.sig
hal_473 Dip_0.025_vs_NRC-1d.sig
hal_485 idr1_40min_+Fe_vs_NRC1-h1.sig
hal_550 NRC1e_vs_NRC1f.sig
hal_600 EMS_Treated__000uM-020
hal_603 EMS_Treated__000uM-050
hal_604 EMS_Treated__000uM-060
hal_623 boa4__HO_L_vs_NRC-1
hal_624 boa4__LO_D_vs_NRC-1
hal_628 boa1__LO_D_vs_NRC-1
hal_687 NRC1_03720_0.234_rep2_vs_NRC-1g.sig
hal_688 NRC1_03960_0.409_rep2_vs_NRC-1g.sig
hal_689 NRC1_04320_0.578_rep2_vs_NRC-1g.sig
hal_690 NRC1_04476_0.715_rep2_vs_NRC-1g.sig
hal_691 NRC1_05400_0.786_rep2_vs_NRC-1g.sig
hal_692 NRC1_05778_0.722_rep2_vs_NRC-1g.sig
hal_694 NRC1_07740_2.681_rep2_vs_NRC-1g.sig
hal_696 NRC1_09540_4.690_rep2_vs_NRC-1g.sig
hal_697 NRC1_10260_4.540_rep2_vs_NRC-1g.sig
hal_698 NRC1_10980_4.935_rep2_vs_NRC-1g.sig
hal_699 NRC1_11700_5.730_rep2_vs_NRC-1g.sig
hal_722 H2O2_Const._set_2_0mM_000min_vs_NRC-1f.sig
hal_723 H2O2_Const._set_2_0mM_030min_vs_NRC-1f.sig
hal_724 H2O2_Const._set_2_0mM_060min_vs_NRC-1f.sig
hal_725 H2O2_Const._set_2_0mM_120min_vs_NRC-1f.sig
hal_726 H2O2_Const._set_2_0mM_240min_vs_NRC-1f.sig
hal_737 PQ_Const._set_2_0mM_030min_vs_NRC-1f.sig
hal_751 H2O2_Const._set_1_0mM_030min_vs_NRC-1f.sig
hal_752 H2O2_Const._set_1_0mM_060min_vs_NRC-1f.sig
hal_764 PQ_Const._set_1_0mM_000min_vs_NRC-1f.sig
hal_767 PQ_Const._set_1_0mM_120min_vs_NRC-1f.sig
hal_768 PQ_Const._set_1_0mM_240min_vs_NRC-1f.sig
hal_792 NRC1e_vs_NRC1f_ctrl.sig
hal_847 PQ_Const._set_3_4mM_080min_vs_NRC-1h1.sig
hal_849 PQ_Const._set_4_4mM_-001min_vs_NRC-1h1.sig
hal_853 PQ_Const._set_4_4mM_040min_vs_NRC-1h1.sig
hal_854 PQ_Const._set_4_4mM_080min_vs_NRC-1h1.sig
hal_895 gamma__2500gy-0000m
hal_903 gamma__2500gy-0480m
hal_940 H2O2_Recov._set_2_25mM_120min_vs_NRC-1f.sig
hal_979 KO_1179C.2_0.6018_vs_NRC-1_h1.sig

De novo detected cis-regulatory motifs

CRM ID eval PSSM
hal_10154_1 0.1700
hal_10154_2 4800.0000

GREs assigned to hal_10154

GRE ID PSSM
hal_9
hal_0

Corems associated with hal_10154

Corem
hc164
hc1838
hc20779
hc31942
hc3280
hc3404
hc473
hc635
hc639
hc7316
hc7884
hc9692