hal_115679 Co-expression

Genes in hal_115679

Organism Gene name Common name Accession Description Start Stop Strand Chromosome
Halobacterium salinarum sp. NRC-1 VNG0285C VNG0285C NP_279392.1 Vng0285c 229052 229441 + NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG0286C VNG0286C NP_279393.1 Vng0286c 229443 230597 + NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG0439C VNG0439C NP_279504.1 Vng0439c 339384 338014 - NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG1143G rps2p NP_280047.1 30S ribosomal protein S2P 865466 866215 + NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG1543G zim NP_280348.1 CTAG modification methylase 1150451 1151497 + NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG1724G adk NP_280483.1 adenylate kinase 1276049 1276699 + NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG1726G htlB NP_280484.1 Htr-like protein 1276763 1277635 + NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG1774G hemA NP_280518.1 glutamyl-tRNA reductase 1314716 1313406 - NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG1775C VNG1775C NP_280519.1 Vng1775c 1315375 1314713 - NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG1829G guaAb NP_280557.1 GMP synthase subun 1350047 1349130 - NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG1830G pyrG NP_280558.1 CTP synthase 1351708 1350047 - NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG2117C VNG2117C NP_280777.1 Vng2117c 1556149 1555430 - NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG2118G pyrE2 NP_280778.1 orotate phosphoribosyl transferase 1556755 1556228 - NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG2205H VNG2205H NP_280855.1 Vng2205h 1634861 1635313 + NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG2206G pmu1 NP_280856.1 phosphomannomutase 1635310 1636677 + NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG2547G valS NP_281122.1 valyl-tRNA synthetase 1911486 1908841 - NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG2581H VNG2581H NP_281146.1 Vng2581h 1935013 1935207 + NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG2582H VNG2582H NP_281147.1 Vng2582h 1935261 1935623 + NC_002607.1

Conditions in hal_115679

Condition ID Condition Name
hal_1051 O2_0258_-0001_L2H_vs_NRC1d.sig
hal_1052 O2_0258_0005_H_vs_NRC1d.sig
hal_1053 O2_0258_0010_H_vs_NRC1d.sig
hal_1054 O2_0258_0020_H_vs_NRC1d.sig
hal_1057 O2_0258_0090_H_vs_NRC1d.sig
hal_1108 o2_set3_0045_min_HO2_vs_NRC1f.sig
hal_1109 o2_set3_0060_min_HO2_vs_NRC1f.sig
hal_1114 o2_set3_0300_min_HO2_vs_NRC1f.sig
hal_1115 o2_set3_0360_min_HO2_vs_NRC1f.sig
hal_1116 o2_set3_0420_min_HO2_vs_NRC1f.sig
hal_1117 o2_set3_0540_min_HO2_vs_NRC1f.sig
hal_1118 o2_set3_0600_min_HO2_vs_NRC1f.sig
hal_1119 o2_set3_0660_min_HO2_vs_NRC1f.sig
hal_1156 20061006_Cmyc_tfbD_rep1_0.185_vs_NRC-1e.sig
hal_1158 20061006_Cmyc_tfbD_rep1_0.899_vs_NRC-1e.sig
hal_1165 20060818_KO_ura3_rep2_0.189_vs_NRC-1e.sig
hal_1166 20060818_KO_ura3_rep2_0.376_vs_NRC-1e.sig
hal_1167 20060818_KO_ura3_rep2_0.828_vs_NRC-1e.sig
hal_1183 20060818_KO_tfbA_rep2_0.208_vs_NRC-1e.sig
hal_1184 20060818_KO_tfbA_rep2_0.425_vs_NRC-1e.sig
hal_1185 20060818_KO_tfbA_rep2_0.839_vs_NRC-1e.sig
hal_1192 20060818_KO_hpyA_rep1_0.161_vs_NRC-1e.sig
hal_1193 20060818_KO_hpyA_rep1_0.421_vs_NRC-1e.sig
hal_1194 20060818_KO_hpyA_rep1_0.831_vs_NRC-1e.sig
hal_1207 20060717_Cmyc_tbpE_rep2_0.192_vs_NRC-1d.sig
hal_1208 20060717_Cmyc_tbpE_rep2_0.453_vs_NRC-1d.sig
hal_1222 20060717_Cmyc_tbpC_rep1_0.199_vs_NRC-1d.sig
hal_1223 20060717_Cmyc_tbpC_rep1_0.407_vs_NRC-1d.sig
hal_1229 20060717_Cmyc_tbpB_rep1_0.431_vs_NRC-1e.sig
hal_127 circadian_20051021_cycling_dark_42oC_1440min_vs_NRC-1d.sig
hal_1272 20060308_KO_tbpA_rep2_0.212_vs_NRC-1e.sig
hal_1273 20060308_KO_tbpA_rep2_0.405_vs_NRC-1e.sig
hal_1277 20060308_KO_tbpA_rep1_0.813_vs_NRC-1e.sig
hal_128 circadian_20051021_cycling_dark_42oC_1615min_vs_NRC-1d.sig
hal_129 circadian_20051021_cycling_dark_42oC_1800min_vs_NRC-1d.sig
hal_130 circadian_20051021_cycling_dark_42oC_1985min_vs_NRC-1d.sig
hal_131 circadian_20051021_cycling_dark_42oC_2160min_vs_NRC-1d.sig
hal_132 circadian_20051021_cycling_dark_42oC_2340min_vs_NRC-1d.sig
hal_133 circadian_20051021_cycling_dark_42oC_2515min_vs_NRC-1d.sig
hal_134 circadian_20051021_cycling_dark_42oC_2705min_vs_NRC-1d.sig
hal_1357 KO_asnC.2_0.1825_vs_NRC-1_h1.sig
hal_1359 KO_asnC.2_0.6128_vs_NRC-1_h1.sig
hal_1369 KO_asnC_0.1774_vs_NRC-1h1.sig
hal_1372 KO_asnC_1.3076_vs_NRC-1h1.sig
hal_1377 NRC-1.2_0.1684_vs_NRC-1_h1.sig
hal_1380 NRC-1.2_1.1065_vs_NRC-1_h1.sig
hal_1387 KO_trh4.2_0.4373_vs_NRC-1_h1.sig
hal_1397 NRC-1_0.1779_vs_NRC-1_h1.sig
hal_1399 NRC-1_0.3882_vs_NRC-1_h1.sig
hal_231 Circadian_Dark10_Cycling_-2670min_vs_NRC-1h1.sig
hal_232 Circadian_Dark10_Cycling_-2490min_vs_NRC-1h1.sig
hal_233 Circadian_Dark10_Cycling_-2315min_vs_NRC-1h1.sig
hal_235 Circadian_Dark10_Cycling_-1960min_vs_NRC-1h1.sig
hal_236 Circadian_Dark10_Cycling_-1785min_vs_NRC-1h1.sig
hal_237 Circadian_Dark10_Cycling_-1595min_vs_NRC-1h1.sig
hal_238 Circadian_Dark10_Cycling_-1410min_vs_NRC-1h1.sig
hal_239 Circadian_Dark10_Cycling_-1245min_vs_NRC-1h1.sig
hal_240 Circadian_Dark10_Cycling_-1060min_vs_NRC-1h1.sig
hal_241 Circadian_Dark10_Cycling_-0880min_vs_NRC-1h1.sig
hal_243 Circadian_Dark10_Cycling_-0525min_vs_NRC-1h1.sig
hal_244 Circadian_Dark10_Cycling_-0360min_vs_NRC-1h1.sig
hal_245 Circadian_Dark10_Cycling_-0165min_vs_NRC-1h1.sig
hal_246 Circadian_Dark10_Cycling_0000min_vs_NRC-1h1.sig
hal_250 Circadian_Dark10_Cycling_0750min_vs_NRC-1h1.sig
hal_255 Circadian_Dark10_Cycling_1635min_vs_NRC-1h1.sig
hal_257 Circadian_Dark10_Cycling_1980min_vs_NRC-1h1.sig
hal_263 Circadian_Dark10_Cycling_3070min_vs_NRC-1h1.sig
hal_267 Circadian_Dark10_Cycling_3790min_vs_NRC-1h1.sig
hal_269 Circadian_Dark10_Cycling_4150min_vs_NRC-1h1.sig
hal_304 ZnSO4_ts_set-1_080min_vs_NRC-1h1.sig
hal_336 Cu_vng1179_KO_set1_-030min_vs_NRC-1h1.sig
hal_337 Cu_vng1179_KO_set1_000min_vs_NRC-1h1.sig
hal_338 Cu_vng1179_KO_set1_005min_vs_NRC-1h1.sig
hal_339 Cu_vng1179_KO_set1_010min_vs_NRC-1h1.sig
hal_342 Cu_vng1179_KO_set1_080min_vs_NRC-1h1.sig
hal_343 Cu_vng1179_KO_set1_160min_vs_NRC-1h1.sig
hal_352 Cu_vng149_KO_set1_-030min_vs_NRC-1h1.sig
hal_353 Cu_vng149_KO_set1_000min_vs_NRC-1h1.sig
hal_354 Cu_vng149_KO_set1_005min_vs_NRC-1h1.sig
hal_359 Cu_vng149_KO_set1_160min_vs_NRC-1h1.sig
hal_384 Cu_vng1179_set2_-030min_vs_NRC-1h1.sig
hal_385 Cu_vng1179_set2_000min_vs_NRC-1h1.sig
hal_386 Cu_vng1179_set2_005min_vs_NRC-1h1.sig
hal_387 Cu_vng1179_set2_010min_vs_NRC-1h1.sig
hal_388 Cu_vng1179_set2_020min_vs_NRC-1h1.sig
hal_389 Cu_vng1179_set2_040min_vs_NRC-1h1.sig
hal_390 Cu_vng1179_set2_080min_vs_NRC-1h1.sig
hal_477 Co_0.2_vs_NRC-1d.sig
hal_544 cspD1_-0001_L_H_vs_NRC1d.sig
hal_545 cspD1_0005_H_vs_NRC1d.sig
hal_549 cspD1_0180_H_vs_NRC1d.sig
hal_550 NRC1e_vs_NRC1f.sig
hal_554 NRC-1__LO_L_vs_NRC-1
hal_555 kinA2_II__HO_D_vs_NRC-1c
hal_557 kinA2_II__LO_D_vs_NRC-1c
hal_562 kinA2_I__LO_L_vs_NRC-1
hal_638 NRC1_H2O_0540_0.220_rep2_vs_NRC-1g.sig
hal_639 NRC1_H2O_0890_0.468_rep2_vs_NRC-1g.sig
hal_641 NRC1_H2O_1860_0.733_rep2_vs_NRC-1g.sig
hal_642 NRC1_H2O_2280_0.764_rep2_vs_NRC-1g.sig
hal_643 NRC1_H2O_2760_0.913_rep2_vs_NRC-1g.sig
hal_668 Dura3_Uracil_1860_0.756_rep2_vs_NRC-1g.sig
hal_669 Dura3_Uracil_2280_0.830_rep2_vs_NRC-1g.sig
hal_670 Dura3_Uracil_2760_0.970_rep2_vs_NRC-1g.sig
hal_671 Dura3_Uracil_3120_1.147_rep2_vs_NRC-1g.sig
hal_776 20060818_NRC1_rep1_0.195_vs_NRC-1e.sig
hal_777 20060818_NRC1_rep1_0.430_vs_NRC-1e.sig
hal_832 NRC-1_control_1week_vs_NRC-1h1.sig
hal_833 NRC-1_control_2days_vs_NRC-1h1.sig
hal_865 EMS_Treated__100000uM-000
hal_867 EMS_Treated__100000uM-020
hal_869 EMS_Treated__100000uM-040
hal_870 EMS_Treated__100000uM-050
hal_872 EMS_Treated__100000uM-120
hal_873 MDM250gSalt_0.204_vs_NRC-1e.sig
hal_875 MDM250gSalt_0.481_vs_NRC-1e.sig
hal_901 gamma__2500gy-0120m
hal_902 gamma__2500gy-0240m
hal_906 H2O2_Recov._set_3_25mM_010min_vs_NRC-1f.sig
hal_908 H2O2_Recov._set_3_25mM_030min_vs_NRC-1f.sig
hal_909 H2O2_Recov._set_3_25mM_040min_vs_NRC-1f.sig
hal_910 H2O2_Recov._set_3_25mM_050min_vs_NRC-1f.sig
hal_911 H2O2_Recov._set_3_25mM_060min_vs_NRC-1f.sig
hal_912 H2O2_Recov._set_3_25mM_120min_vs_NRC-1f.sig
hal_913 H2O2_Recov._set_3_25mM_240min_vs_NRC-1f.sig
hal_985 idr1-2_0min_1mM_EDTA_vs_NRC1-h1.sig
hal_988 idr1-2_60min_1mM_EDTA_vs_NRC1-h1.sig

De novo detected cis-regulatory motifs

CRM ID eval PSSM
hal_115679_1 0.0001
hal_115679_2 3.2000

GREs assigned to hal_115679

GRE ID PSSM
hal_0
hal_0

Corems associated with hal_115679

Corem
hc20960
hc29798
hc29805
hc29812
hc29820
hc29821
hc29825
hc29866