hal_91141 Co-expression

Genes in hal_91141

Organism Gene name Common name Accession Description Start Stop Strand Chromosome
Halobacterium salinarum sp. NRC-1 VNG0280H VNG0280H NP_279387.1 Vng0280h 224468 223518 - NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG0415G purB NP_279486.1 adenylosuccinate lyase 323468 324955 + NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG0430H VNG0430H NP_279498.1 Vng0430h 333338 332688 - NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG0446G gcd NP_279511.1 glucose dehydrogenase 345205 346275 + NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG0479G yajO1 NP_279536.1 probable oxidoreductase 370787 369837 - NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG0882G 0 0 + NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG0986H VNG0986H NP_279923.1 Vng0986h 752276 752803 + NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG1375C VNG1375C NP_280222.1 Vng1375c 1025206 1026540 + NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG1382H VNG1382H NP_280228.1 Vng1382h 1030300 1030734 + NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG1525C VNG1525C NP_280334.1 Vng1525c 1134599 1132953 - NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG1886C VNG1886C NP_280602.1 Vng1886c 1394925 1394134 - NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG2493C VNG2493C NP_281079.1 Vng2493c 1864085 1864888 + NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG5175H 0 0 + NC_002607.1
Halobacterium salinarum sp. NRC-1 VNG6293C VNG6293C NP_395795.1 Vng6293c 223741 224679 + NC_002608.1

Conditions in hal_91141

Condition ID Condition Name
hal_1024 ura3_0min_-EDTA_CM_vs_NRC1-h1.sig
hal_1025 ura3_20min_-EDTA_CM_vs_NRC1-h1.sig
hal_1129 gamma2__0000gy-0000m
hal_1131 gamma2__0000gy-0020m
hal_1132 gamma2__0000gy-0030m
hal_1133 gamma2__0000gy-0040m
hal_1136 gamma2__0000gy-0120m
hal_1137 gamma2__0000gy-0240m
hal_1207 20060717_Cmyc_tbpE_rep2_0.192_vs_NRC-1d.sig
hal_1209 20060717_Cmyc_tbpE_rep2_0.899_vs_NRC-1d.sig
hal_1240 20060717_Cmyc_rep1_0.221_vs_NRC-1e.sig
hal_1241 20060717_Cmyc_rep1_0.402_vs_NRC-1e.sig
hal_1242 20060717_Cmyc_rep1_0.827_vs_NRC-1e.sig
hal_1256 20060308_KO_tfbB_rep2_0.934_vs_NRC-1e.sig
hal_1261 20060308_KO_tbpD_rep2_0.434_vs_NRC-1e.sig
hal_1262 20060308_KO_tbpD_rep2_0.841_vs_NRC-1e.sig
hal_1290 20050726_Cmyc_tfbF_rep1_0.198_vs_NRC-1d.sig
hal_1291 20050726_Cmyc_tfbF_rep1_0.490_vs_NRC-1d.sig
hal_1295 20050726_Cmyc_tfbC_rep2_0.430_vs_NRC-1d.sig
hal_1297 20050726_Cmyc_tfbC_rep2_1.114_vs_NRC-1d.sig
hal_1305 20050726_Cmyc_tfbB_rep2_1.041_vs_NRC-1d.sig
hal_1330 20050620_Cmyc_tfbE_rep2_0.118_vs_NRC-1d.sig
hal_1332 20050620_Cmyc_tfbE_rep2_1.042_vs_NRC-1d.sig
hal_1345 20050620_Cmyc_rep1_0.207_vs_NRC-1d.sig
hal_1438 sDura3D1179_pCu_d1.000mM_t+060m_vs_NRC-1h1.sig
hal_1440 sDura3D1179_pCu_d1.000mM_t-015m_vs_NRC-1h1.sig
hal_1446 sDura3D1179_pZn_d0.005mM_t+015m_vs_NRC-1h1.sig
hal_1448 sDura3D1179_pZn_d0.005mM_t+060m_vs_NRC-1h1.sig
hal_1451 sDura3D1179_pZn_d0.020mM_t+015m_vs_NRC-1h1.sig
hal_1452 sDura3D1179_pZn_d0.020mM_t+030m_vs_NRC-1h1.sig
hal_1454 sDura3D1179_pZn_d0.020mM_t+180m_vs_NRC-1h1.sig
hal_1467 sDura3_pCu_d0.700mM_t+030m_vs_NRC-1h1.sig
hal_1469 sDura3_pCu_d0.700mM_t+180m_vs_NRC-1h1.sig
hal_160 circadian_drk8_control_0000min_vs_NRC-1e.sig
hal_162 circadian_drk8_control_0360min_vs_NRC-1e.sig
hal_163 circadian_drk8_control_0540min_vs_NRC-1e.sig
hal_164 circadian_drk8_control_0720min_vs_NRC-1e.sig
hal_165 circadian_drk8_control_0900min_vs_NRC-1e.sig
hal_166 circadian_drk8_control_1080min_vs_NRC-1e.sig
hal_171 circadian_drk8_control_1980min_vs_NRC-1e.sig
hal_174 circadian_drk8_control_2520min_vs_NRC-1e.sig
hal_178 circadian_drk8_control_3240min_vs_NRC-1e.sig
hal_26 dark2__0000m_vs_NRC-1c
hal_27 dark2__0060m_vs_NRC-1c
hal_275 zn__0005um_vs_NRC-1
hal_28 dark2__0300m_vs_NRC-1c
hal_30 dark2__0780m_vs_NRC-1c
hal_31 dark2__1020m_vs_NRC-1c
hal_32 dark2__1260m_vs_NRC-1c
hal_328 Cu_ura3_KO_set1_-030min_vs_NRC-1h1.sig
hal_329 Cu_ura3_KO_set1_000min_vs_NRC-1h1.sig
hal_33 dark2__1500m_vs_NRC-1c
hal_335 Cu_ura3_KO_set1_160min_vs_NRC-1h1.sig
hal_34 dark2__1740m_vs_NRC-1c
hal_369 Cu_vng700_KO_set2_000min_vs_NRC-1h1.sig
hal_37 dark2__2460m_vs_NRC-1c
hal_370 Cu_vng700_KO_set2_005min_vs_NRC-1h1.sig
hal_372 Cu_vng700_KO_set2_020min_vs_NRC-1h1.sig
hal_373 Cu_vng700_KO_set2_040min_vs_NRC-1h1.sig
hal_374 Cu_vng700_KO_set2_080min_vs_NRC-1h1.sig
hal_39 dark2__2940m_vs_NRC-1c
hal_392 Cu_NRC1_set2_-030min_vs_NRC-1h1.sig
hal_393 Cu_NRC1_set2_000min_vs_NRC-1h1.sig
hal_395 Cu_NRC1_set2_010min_vs_NRC-1h1.sig
hal_398 Cu_NRC1_set2_080min_vs_NRC-1h1.sig
hal_399 Cu_NRC1_set2_160min_vs_NRC-1h1.sig
hal_409 ura3_0b_vs_NRC-1d.sig
hal_414 ura3_Cu_0850um_b_vs_NRC-1d.sig
hal_415 ura3_Cu_1000um_b_vs_NRC-1d.sig
hal_42 dark2__3660m_vs_NRC-1c
hal_420 ura3_Mn_1500um_b_vs_NRC-1d.sig
hal_421 ura3_Mn_1000um_b_vs_NRC-1d.sig
hal_445 idr2_40min_+Fe_vs_NRC1-h1.sig
hal_458 fe__2000um_vs_NRC-1
hal_459 fe__4000um_vs_NRC-1
hal_460 fe__6000um_vs_NRC-1
hal_461 fe__7000um_vs_NRC-1
hal_485 idr1_40min_+Fe_vs_NRC1-h1.sig
hal_486 idr1_60min_+Fe_vs_NRC1-h1.sig
hal_577 htlD__LO_D_vs_NRC-1
hal_641 NRC1_H2O_1860_0.733_rep2_vs_NRC-1g.sig
hal_642 NRC1_H2O_2280_0.764_rep2_vs_NRC-1g.sig
hal_643 NRC1_H2O_2760_0.913_rep2_vs_NRC-1g.sig
hal_644 NRC1_H2O_3120_1.086_rep2_vs_NRC-1g.sig
hal_679 Dun_F2_005minb_vs_NRC-1g.sig
hal_680 Dun_F2_010minb_vs_NRC-1g.sig
hal_684 Dun_F2_160minb_vs_NRC-1g.sig
hal_685 Dun_F2_320minb_vs_NRC-1g.sig
hal_728 PQ_Recov._set_2_0mM_010min_vs_NRC-1f.sig
hal_730 PQ_Recov._set_2_0mM_030min_vs_NRC-1f.sig
hal_733 PQ_Recov._set_2_0mM_060min_vs_NRC-1f.sig
hal_779 H2O2_Const._set_3_25mM_-001min_vs_NRC-1h1.sig
hal_780 H2O2_Const._set_3_25mM_005min_vs_NRC-1h1.sig
hal_781 H2O2_Const._set_3_25mM_010min_vs_NRC-1h1.sig
hal_782 H2O2_Const._set_3_25mM_020min_vs_NRC-1h1.sig
hal_783 H2O2_Const._set_3_25mM_040min_vs_NRC-1h1.sig
hal_784 H2O2_Const._set_3_25mM_080min_vs_NRC-1h1.sig
hal_785 H2O2_Const._set_3_25mM_160min_vs_NRC-1h1.sig
hal_791 ura3_growth_t3_exp2_0.8OD_vs_NRC1f.sig
hal_797 ura3_+glu_a_OD1.2_vs_NRC1e.sig
hal_804 ura3_growth_t4_exp2_1.2OD_vs_NRC1f.sig
hal_805 ura3_growth_t1_exp3_0.3OD_vs_NRC1f.sig
hal_806 ura3_growth_t2_exp3_0.5OD_vs_NRC1f.sig
hal_807 ura3_growth_t3_exp3_0.8OD_vs_NRC1f.sig
hal_820 ura3_+glu_a_OD0.2_vs_NRC1e.sig
hal_821 ura3_+glu_a_OD0.6repl_vs_NRC1e.sig
hal_822 ura3_+glu_a_OD1.2repl_vs_NRC1e.sig
hal_823 ura3_+glu_b_OD0.2_vs_NRC1g.sig
hal_827 ura3_-glu_a_OD0.6repl_vs_NRC1e.sig
hal_830 ura3_-glu_b_OD0.6repl_vs_NRC1g.sig
hal_842 PQ_Const._set_3_4mM_-001min_vs_NRC-1h1.sig
hal_844 PQ_Const._set_3_4mM_010min_vs_NRC-1h1.sig
hal_845 PQ_Const._set_3_4mM_020min_vs_NRC-1h1.sig
hal_846 PQ_Const._set_3_4mM_040min_vs_NRC-1h1.sig
hal_856 KO_ura3.2_0.1716_vs_NRC-1_h1.sig
hal_858 KO_ura3.2_0.4308_vs_NRC-1_h1.sig
hal_863 ura3_growth_t2exp1_0.5OD_vs_NRC1e.sig
hal_865 EMS_Treated__100000uM-000
hal_866 EMS_Treated__100000uM-010
hal_867 EMS_Treated__100000uM-020
hal_868 EMS_Treated__100000uM-030
hal_871 EMS_Treated__100000uM-060
hal_872 EMS_Treated__100000uM-120
hal_953 PQ_Recov._set_1_4mM_060min_vs_NRC-1f.sig
hal_955 PQ_Recov._set_1_4mM_240min_vs_NRC-1f.sig
hal_982 ura3_20min_1mM_EDTA_vs_NRC1-h1.sig
hal_983 ura3_40min_1mM_EDTA_vs_NRC1-h1.sig
hal_984 ura3_60min_1mM_EDTA_vs_NRC1-h1.sig
hal_989 idr1_0min_1mM_EDTA_vs_NRC1-h1.sig
hal_990 idr1_20min_1mM_EDTA_vs_NRC1-h1.sig

De novo detected cis-regulatory motifs

CRM ID eval PSSM
hal_91141_1 0.0003
hal_91141_2 770.0000

GREs assigned to hal_91141

GRE ID PSSM
hal_0
hal_0

Corems associated with hal_91141

Corem
hc1043
hc10908
hc10909
hc15353
hc1627
hc1658
hc4263
hc5188
hc8730
hc921
hc926
hc928
hc9676