Regulator GadW

GREs

GRE ID PSSM Score
eco_35 0.0000000000000000

Corems

Corem ID GRE pval
ec515458 eco_35 0.0000000000000
ec523215 eco_35 0.0000000000003
ec523219 eco_35 0.0000000000000
ec524801 eco_35 0.0000000009176
ec545683 eco_35 0.0000000390080

Genes

Gene name Common name Description Start Stop Strand Chromosome GRE pval
b0485 ybaS predicted glutaminase 510865 511797 + NC_000913.2 eco_35 0.0000000000000
b0486 ybaT predicted transporter 511800 513092 + NC_000913.2 eco_35 0.0000180017800
b0999 cbpM modulator of CbpA co-chaperone 1062078 1061773 - NC_000913.2 eco_35 0.0000000013048
b1000 cbpA curved DNA-binding protein, DnaJ homologue that functions as a co-chaperone of DnaK 1062998 1062078 - NC_000913.2 eco_35 0.0000035964630
b1003 yccJ hypothetical protein 1066314 1066087 - NC_000913.2 eco_35 0.0000805975400
b1492 gadC predicted glutamate:gamma-aminobutyric acid antiporter 1568513 1566978 - NC_000913.2 eco_35 0.0000000000000
b1493 gadB glutamate decarboxylase B, PLP-dependen 1570069 1568669 - NC_000913.2 eco_35 0.0000000000000
b1619 hdhA 7-alpha-hydroxysteroid dehydrogenase 1696064 1695297 - NC_000913.2 eco_35 0.0000001830109
b3491 yhiM conserved inner membrane protein 3632864 3633916 + NC_000913.2 eco_35 0.0000004732223
b3506 slp outer membrane protein induced after carbon starvation 3651984 3652550 + NC_000913.2 eco_35 0.0000000000000
b3507 dctR protein involved in metabolism of C4-dicarboxylates (Katherine Huang 3652706 3653236 + NC_000913.2 eco_35 0.0000018496460
b3508 yhiD predicted Mg(2+) transport ATPase inner membrane protein 3653925 3653278 - NC_000913.2 eco_35 0.0000000000000
b3509 hdeB orf, hypothetical protein 3654315 3653989 - NC_000913.2 eco_35 0.0000000000000
b3511 hdeD acid-resistance membrane protein 3655018 3655590 + NC_000913.2 eco_35 0.0000000000000
b3512 GadE acid-responsive regulator of gadA and gadBC (Katherine Huang 3656389 3656916 + NC_000913.2 eco_35 0.0000000000000
b3514 mdtF multidrug transporter, RpoS-dependen 3658437 3661550 + NC_000913.2 eco_35 0.0000513868700
b3515 gadW DNA-binding transcriptional activator 3662641 3661913 - NC_000913.2 eco_35 0.0000000000000
b3516 gadX DNA-binding transcriptional dual regulator 3663833 3663009 - NC_000913.2 eco_35 0.0000000000000
b3517 gadA glutamate decarboxylase A, PLP-dependen 3665603 3664203 - NC_000913.2 eco_35 0.0000000000000
b3922 yiiS hypothetical protein 4110990 4111289 + NC_000913.2 eco_35 0.0001097983000
b4377 yjjU predicted esterase 4610434 4611507 + NC_000913.2 eco_35 0.0000798566900

Conditions

Condition ID Condition Name GRE pval
eco_1 1282 34 0.0211844300000
eco_103 GSM120166 34 0.0007068495000
eco_104 GSM120192 34 0.0072552920000
eco_105 GSM120193 34 0.0056400170000
eco_107 GSM137283 34 0.0242073700000
eco_109 GSM1379 34 0.0000014918200
eco_11 Clean_ANA12 34 0.0000067919350
eco_112 GSM18247 34 0.0035790370000
eco_113 GSM18251 34 0.0229802700000
eco_115 GSM18255 34 0.0000005929317
eco_116 GSM18256 34 0.0000417665700
eco_117 GSM18257 34 0.0024209450000
eco_118 GSM18260 34 0.0212440100000
eco_119 GSM18262 34 0.0012738870000
eco_12 Clean_ANA13 34 0.0006897634000
eco_120 GSM18263 34 0.0068165770000
eco_121 GSM18264 34 0.0133553400000
eco_123 GSM18279 34 0.0000120861700
eco_124 GSM18285 34 0.0059885370000
eco_126 GSM30817 34 0.0326405000000
eco_127 GSM30820 34 0.0000650964400
eco_128 GSM30821 34 0.0026223630000
eco_129 GSM35417 34 0.0005573357000
eco_13 Clean_ANA6 34 0.0037061030000
eco_130 GSM37067 34 0.0316283200000
eco_131 GSM37069 34 0.0061994920000
eco_132 GSM37071 34 0.0004386284000
eco_134 GSM37077 34 0.0101320500000
eco_136 GSM38547 34 0.0000000701728
eco_14 Clean_ANA7 34 0.0487853300000
eco_140 GSM63887 34 0.0002283632000
eco_146 GSM65629 34 0.0000135797300
eco_147 GSM65630 34 0.0001304941000
eco_15 Clean_DIAUX11 34 0.0421178100000
eco_151 GSM73124 34 0.0040884840000
eco_157 GSM73141 34 0.0032388840000
eco_159 GSM73145 34 0.0017460370000
eco_166 GSM73159 34 0.0232122200000
eco_167 GSM73160 34 0.0001630176000
eco_169 GSM73258 34 0.0002040063000
eco_17 Clean_DIAUX13 34 0.0063912270000
eco_170 GSM73263 34 0.0041767250000
eco_171 GSM73264 34 0.0006830943000
eco_172 GSM73265 34 0.0053878670000
eco_173 GSM73270 34 0.0300154800000
eco_182 GSM77343 34 0.0018769270000
eco_183 GSM77351 34 0.0146466000000
eco_190 GSM8120 34 0.0047691000000
eco_191 GSM82542 34 0.0000000462821
eco_192 GSM82545 34 0.0000020367200
eco_193 GSM82548 34 0.0000022543790
eco_194 GSM82551 34 0.0009866982000
eco_195 GSM82603 34 0.0108363700000
eco_196 GSM82613 34 0.0006602518000
eco_197 GSM82616 34 0.0062207520000
eco_198 GSM83055 34 0.0000241420200
eco_199 GSM83058 34 0.0006092036000
eco_2 1285 34 0.0000127953000
eco_200 GSM83060 34 0.0099486890000
eco_202 GSM83065 34 0.0008866258000
eco_204 GSM83071 34 0.0023404240000
eco_205 GSM83077 34 0.0077092490000
eco_206 GSM83078 34 0.0002535056000
eco_207 GSM83080 34 0.0020066400000
eco_213 GSM98726 34 0.0000004716127
eco_215 GSM98732 34 0.0189515400000
eco_216 GSM99090 34 0.0079292550000
eco_220 GSM99107 34 0.0015556740000
eco_226 GSM99121 34 0.0482225600000
eco_227 GSM99122 34 0.0000019981950
eco_230 GSM99132 34 0.0000003613280
eco_231 GSM99133 34 0.0001344905000
eco_232 GSM99136 34 0.0008978796000
eco_240 GSM99181 34 0.0214671000000
eco_241 GSM99184 34 0.0181809600000
eco_245 GSM99196 34 0.0273947600000
eco_246 GSM99197 34 0.0000000001984
eco_249 GSM99211 34 0.0358827900000
eco_250 GSM99215 34 0.0127802500000
eco_251 GSM99384 34 0.0014556050000
eco_252 GSM99392 34 0.0001768961000
eco_253 GSM99393 34 0.0001581880000
eco_267 5278 34 0.0482704600000
eco_269 ANAEROBIC_CH 34 0.0416153000000
eco_270 Clean_ANA3 34 0.0325464400000
eco_271 Clean_DIAUX4 34 0.0269532000000
eco_276 cysB__G 34 0.0230818200000
eco_277 EC_GLU_WILD_A 34 0.0000040872250
eco_278 EC_GLU_WILD_C 34 0.0000763242400
eco_279 EC_GLY_GLY2_20_C 34 0.0043933010000
eco_283 EC_GLY_GLYE_44_B 34 0.0001397316000
eco_29 crpfur 34 0.0026261090000
eco_293 E-MEXP-244-raw-data-396455098.txt 34 0.0004016955000
eco_294 E-MEXP-245-raw-data-396455413.txt 34 0.0000674151400
eco_295 E-MEXP-267-raw-data-495080191.txt 34 0.0226358400000
eco_296 E-MEXP-267-raw-data-495080351.txt 34 0.0088881870000
eco_30 cysB 34 0.0001325352000
eco_307 GSM101775 34 0.0000483289600
eco_309 GSM101779 34 0.0321945600000
eco_310 GSM106339 34 0.0097515320000
eco_311 GSM106340 34 0.0075610330000
eco_314 GSM106759 34 0.0089263990000
eco_316 GSM111419 34 0.0003849688000
eco_317 GSM114370 34 0.0221990300000
eco_32 EC_GLY_GLY1_44_A 34 0.0000071311230
eco_331 GSM1381 34 0.0008022099000
eco_332 GSM18249 34 0.0026499870000
eco_333 GSM18258 34 0.0006140648000
eco_335 GSM18271 34 0.0204761300000
eco_339 GSM23465 34 0.0000058014680
eco_344 GSM62196 34 0.0182128100000
eco_347 GSM65624 34 0.0340795300000
eco_348 GSM65636 34 0.0027436310000
eco_350 GSM73120 34 0.0310781600000
eco_354 GSM73147 34 0.0153633500000
eco_358 GSM73266 34 0.0008316281000
eco_359 GSM73269 34 0.0081664480000
eco_361 GSM73281 34 0.0001174547000
eco_362 GSM77347 34 0.0191242500000
eco_363 GSM77358 34 0.0075814730000
eco_367 GSM8117 34 0.0200999900000
eco_37 EC_GLY_GLYA_44_B 34 0.0001645042000
eco_370 GSM82550 34 0.0030682150000
eco_371 GSM82552 34 0.0346453800000
eco_372 GSM82553 34 0.0192423800000
eco_373 GSM82598 34 0.0000267779400
eco_374 GSM82604 34 0.0002563675000
eco_375 GSM82606 34 0.0007681661000
eco_376 GSM83053 34 0.0000005301784
eco_377 GSM83057 34 0.0047801300000
eco_378 GSM83066 34 0.0001324911000
eco_379 GSM83073 34 0.0000001261769
eco_38 EC_GLY_GLYA_44_C 34 0.0018355660000
eco_380 GSM83074 34 0.0202845200000
eco_381 GSM83081 34 0.0209631800000
eco_382 GSM83083 34 0.0024598640000
eco_383 GSM88912 34 0.0144308800000
eco_386 GSM98731 34 0.0000045138720
eco_387 GSM99084 34 0.0007733168000
eco_394 GSM99125 34 0.0083548590000
eco_395 GSM99138 34 0.0017222830000
eco_396 GSM99143 34 0.0358451300000
eco_404 GSM99183 34 0.0000605939500
eco_407 GSM99193 34 0.0000020851680
eco_412 GSM99390 34 0.0048365590000
eco_413 GSM99391 34 0.0238772900000
eco_416 1290 34 0.0000000060464
eco_417 14829 34 0.0410665900000
eco_418 14831 34 0.0000438080700
eco_425 Clean_TGC12 34 0.0492428400000
eco_427 Clean_TGC6 34 0.0145042900000
eco_429 crpcysB 34 0.0000000055461
eco_43 EC_GLY_WILD_D 34 0.0047416610000
eco_433 EC_LAC_L3_20_C 34 0.0036121010000
eco_434 EC_LAC_LA_60_B 34 0.0020519000000
eco_438 fruR 34 0.0324678900000
eco_444 GSM101767 34 0.0040228140000
eco_445 GSM101768 34 0.0015676560000
eco_451 GSM114371 34 0.0000000115756
eco_453 GSM114385 34 0.0003401189000
eco_455 GSM118617 34 0.0018167460000
eco_456 GSM118622 34 0.0324773900000
eco_459 GSM18237 34 0.0344226700000
eco_460 GSM18259 34 0.0016952640000
eco_465 GSM37068 34 0.0011444280000
eco_469 GSM38546 34 0.0007600093000
eco_470 GSM38548 34 0.0073131520000
eco_475 GSM65623 34 0.0006178866000
eco_476 GSM65628 34 0.0006444153000
eco_477 GSM65634 34 0.0025920610000
eco_487 GSM73268 34 0.0000361794300
eco_488 GSM73279 34 0.0170496700000
eco_49 EC_LAC_LA_60_D 34 0.0360461900000
eco_496 GSM82600 34 0.0029868220000
eco_498 GSM82610 34 0.0188430500000
eco_506 GSM99086 34 0.0100425300000
eco_507 GSM99088 34 0.0000064012510
eco_51 EC_LAC_LB_60_C 34 0.0001531688000
eco_510 GSM99102 34 0.0000001719709
eco_512 GSM99131 34 0.0410067100000
eco_514 GSM99135 34 0.0040358580000
eco_521 GSM99199 34 0.0002469141000
eco_526 STATIONARYPHASE_CH 34 0.0001121303000
eco_527 wt 34 0.0000588370500
eco_529 1292 34 0.0491114800000
eco_53 EC_LAC_LC_60_A 34 0.0239570200000
eco_530 14830 34 0.0000024476370
eco_531 1585 34 0.0000022611980
eco_532 1915 34 0.0000002545901
eco_533 1916 34 0.0054365570000
eco_534 Clean_DIAUX10 34 0.0003463742000
eco_535 Clean_DIAUX5 34 0.0078958380000
eco_537 Clean_TGC5 34 0.0055266400000
eco_538 crp 34 0.0000269169100
eco_539 crpcysB__G 34 0.0000000422510
eco_540 crpfruR__G 34 0.0073284730000
eco_541 crpfur__G 34 0.0044957650000
eco_544 EC_GLY_GLY2_44_A 34 0.0018963960000
eco_545 EC_GLY_GLYD_44_A 34 0.0197642400000
eco_547 EC_GLY_GLYE_20_B 34 0.0009439134000
eco_548 EC_GLY_GLYE_44_C 34 0.0096348710000
eco_552 EC_LAC_LB_60_A 34 0.0037343310000
eco_559 E-MEXP-267-raw-data-495080239.txt 34 0.0000000087447
eco_563 GSM101778 34 0.0001251057000
eco_564 GSM101780 34 0.0000035329000
eco_567 GSM111423 34 0.0000003747807
eco_57 EC_LAC_WILD_E 34 0.0111238500000
eco_573 GSM137282 34 0.0376657600000
eco_575 GSM18253 34 0.0016526840000
eco_580 GSM37887 34 0.0000089746170
eco_582 GSM63891 34 0.0223164300000
eco_585 GSM73132 34 0.0035974660000
eco_589 GSM77359 34 0.0000050560450
eco_59 E-MEXP-222-raw-data-386284924.txt 34 0.0002404064000
eco_590 GSM77361 34 0.0005454123000
eco_591 GSM82608 34 0.0000000022377
eco_592 GSM83056 34 0.0000138691000
eco_593 GSM83061 34 0.0000044527130
eco_594 GSM83064 34 0.0004621866000
eco_595 GSM83070 34 0.0170863600000
eco_596 GSM83076 34 0.0320170600000
eco_597 GSM83082 34 0.0010360450000
eco_60 E-MEXP-222-raw-data-386284973.txt 34 0.0023421050000
eco_603 GSM99087 34 0.0000000000410
eco_604 GSM99123 34 0.0000025785270
eco_605 GSM99130 34 0.0006897686000
eco_606 GSM99137 34 0.0028933150000
eco_607 GSM99141 34 0.0237546600000
eco_619 1909 34 0.0084443030000
eco_62 E-MEXP-222-raw-data-386285101.txt 34 0.0004971111000
eco_620 Clean_DIAUX14 34 0.0318797900000
eco_624 Clean_TGC1 34 0.0470811700000
eco_625 EC_GLY_GLY1_44_C 34 0.0069372140000
eco_63 E-MEXP-244-raw-data-396455082.txt 34 0.0377234600000
eco_631 EC_GLY_GLYE_44_A 34 0.0000000771948
eco_633 EC_GLY_WILD_E 34 0.0002033837000
eco_643 GSM101766 34 0.0000000018893
eco_644 GSM101776 34 0.0029337370000
eco_646 GSM116027 34 0.0064113270000
eco_647 GSM116028 34 0.0011616960000
eco_649 GSM118610 34 0.0389153100000
eco_65 E-MEXP-245-raw-data-396455365.txt 34 0.0028587850000
eco_652 GSM18250 34 0.0273659100000
eco_653 GSM18274 34 0.0165874400000
eco_654 GSM18276 34 0.0476570200000
eco_655 GSM18286 34 0.0000430904800
eco_658 GSM30823 34 0.0002927802000
eco_660 GSM37070 34 0.0004061732000
eco_663 GSM65598 34 0.0125638800000
eco_664 GSM65600 34 0.0047017010000
eco_665 GSM65622 34 0.0247081100000
eco_672 GSM73148 34 0.0014067960000
eco_673 GSM73256 34 0.0025892560000
eco_674 GSM73267 34 0.0418194800000
eco_675 GSM73274 34 0.0099423820000
eco_680 GSM8114 34 0.0016935660000
eco_681 GSM82546 34 0.0195120600000
eco_682 GSM83054 34 0.0000055144370
eco_683 GSM83063 34 0.0002862579000
eco_684 GSM83067 34 0.0126129700000
eco_685 GSM83068 34 0.0042016200000
eco_687 GSM88917 34 0.0097413720000
eco_688 GSM89487 34 0.0247174200000
eco_691 GSM99094 34 0.0107035700000
eco_694 GSM99111 34 0.0006968004000
eco_700 GSM99179 34 0.0003050254000
eco_704 GSM99380 34 0.0035267310000
eco_708 Clean_ANA9 34 0.0008784887000
eco_709 Clean_H2O29 34 0.0302083600000
eco_711 EC_GLY_GLYE_20_C 34 0.0001256361000
eco_712 EC_LAC_LA_20_A 34 0.0329962600000
eco_714 EC_LAC_WILD_B 34 0.0075293020000
eco_717 GADXW_exp4 34 0.0039934570000
eco_719 GSM120196 34 0.0157515600000
eco_72 GSM101230 34 0.0000132460100
eco_722 GSM30816 34 0.0000000635570
eco_723 GSM30822 34 0.0000019768410
eco_726 GSM63888 34 0.0121437300000
eco_733 GSM73142 34 0.0366411500000
eco_734 GSM73252 34 0.0004965243000
eco_739 GSM83079 34 0.0000026834680
eco_74 GSM101233 34 0.0010807550000
eco_740 GSM89485 34 0.0000269349100
eco_741 GSM89486 34 0.0131728300000
eco_75 GSM101234 34 0.0081274300000
eco_750 GSM99178 34 0.0014044030000
eco_756 EC_GLY_GLYB_44_C 34 0.0086622760000
eco_760 EC_LAC_LD_60_B 34 0.0291929600000
eco_763 GADXW_exp5 34 0.0036509280000
eco_768 GSM18278 34 0.0064290540000
eco_769 GSM18282 34 0.0021421700000
eco_77 GSM101240 34 0.0090964970000
eco_771 GSM73127 34 0.0056948840000
eco_776 GSM77342 34 0.0487852400000
eco_777 GSM83059 34 0.0000086502880
eco_778 GSM88919 34 0.0000003282395
eco_784 crp__G 34 0.0022966940000
eco_786 EC_LAC_WILD_C 34 0.0283087200000
eco_79 GSM101771 34 0.0000275368900
eco_790 GSM101774 34 0.0122446100000
eco_791 GSM114383 34 0.0118603300000
eco_794 GSM118601 34 0.0128316000000
eco_795 GSM18246 34 0.0248592400000
eco_798 GSM73253 34 0.0067704910000
eco_799 GSM73259 34 0.0004241649000
eco_80 GSM101772 34 0.0000131957000
eco_801 GSM82547 34 0.0000036975330
eco_802 GSM82620 34 0.0001722717000
eco_804 GSM99093 34 0.0193502600000
eco_806 GSM99175 34 0.0022552370000
eco_81 GSM101773 34 0.0000789949900
eco_810 5272 34 0.0242489600000
eco_813 EC_GLY_GLYB_20_C 34 0.0080460660000
eco_815 GSM101770 34 0.0006261011000
eco_816 GSM106755 34 0.0015667670000
eco_817 GSM18277 34 0.0000426215100
eco_818 GSM73129 34 0.0042877020000
eco_819 GSM77352 34 0.0358938400000
eco_82 GSM106337 34 0.0047532880000
eco_820 GSM89488 34 0.0000039768090
eco_823 EC_GLY_GLYB_44_B 34 0.0000247898200
eco_836 EC_GLY_GLYD_20_B 34 0.0052594770000
eco_84 GSM106757 34 0.0003652356000
eco_841 GSM37076 34 0.0000761158500
eco_842 GSM65639 34 0.0292498600000
eco_845 GSM118604 34 0.0006945298000
eco_85 GSM106758 34 0.0027564960000
eco_850 GSM88918 34 0.0001215666000
eco_851 GSM99112 34 0.0037057800000
eco_856 Clean_ANA20 34 0.0317721800000
eco_857 EC_LAC_LC_60_C 34 0.0018912310000
eco_858 GSM118609 34 0.0003997711000
eco_86 GSM111413 34 0.0346541900000
eco_860 GSM82549 34 0.0003173619000
eco_861 GSM99124 34 0.0311081600000
eco_862 GSM99386 34 0.0364903000000
eco_867 GSM83075 34 0.0028412920000
eco_87 GSM111415 34 0.0252878300000
eco_89 GSM111420 34 0.0000001061358
eco_92 GSM114368 34 0.0055526420000
eco_94 GSM114614 34 0.0094425370000
eco_96 GSM116026 34 0.0105884900000