Regulator GntR
GREs
| GRE ID | PSSM | Score |
|---|---|---|
| eco_45 |  |
0.0000000438032237 |
Corems
| Corem ID | GRE | pval |
|---|---|---|
| ec547622 | eco_45 | 0.0002431396000 |
| ec547663 | eco_45 | 0.0014588100000 |
| ec547737 | eco_45 | 0.0009849875000 |
| ec547870 | eco_45 | 0.0015284290000 |
| ec571438 | eco_45 | 0.0000804069100 |
| ec586912 | eco_45 | 0.0008766392000 |
| ec593624 | eco_45 | 0.0000000000015 |
| ec593697 | eco_45 | 0.0000263381100 |
| ec593712 | eco_45 | 0.0000000000000 |
| ec593778 | eco_45 | 0.0000000000242 |
| ec597943 | eco_45 | 0.0000000000952 |
| ec597945 | eco_45 | 0.0000000002259 |
| ec605250 | eco_45 | 0.0000028983600 |
| ec606466 | eco_45 | 0.0000523902000 |
| ec612589 | eco_45 | 0.0000000000721 |
| ec612612 | eco_45 | 0.0000342331700 |
| ec617473 | eco_45 | 0.0000000000048 |
| ec617490 | eco_45 | 0.0000000000693 |
Genes
| Gene name | Common name | Description | Start | Stop | Strand | Chromosome | GRE | pval |
|---|---|---|---|---|---|---|---|---|
| b0011 | yaaW | hypothetical protein | 11356 | 10643 | - | NC_000913.2 | eco_45 | 0.0000236445300 |
| b0571 | cusR | DNA-binding response regulator in two-component regulatory system with CusS | 594666 | 593983 | - | NC_000913.2 | eco_45 | 0.0001930697000 |
| b1592 | b1592 | putative chloride channe | 1663339 | 1664595 | + | NC_000913.2 | eco_45 | 0.0000042395190 |
| b1669 | ydhT | hypothetical protein | 1747583 | 1746771 | - | NC_000913.2 | eco_45 | 0.0000112605600 |
| b2147 | yeiA | putative oxidoreductase | 2233287 | 2234522 | + | NC_000913.2 | eco_45 | 0.0000460213900 |
| b2219 | atoS | sensory histidine kinase in two-component regulatory system with Ato | 2318065 | 2319891 | + | NC_000913.2 | eco_45 | 0.0001246066000 |
| b2220 | atoC | fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein | 2319888 | 2321273 | + | NC_000913.2 | eco_45 | 0.0000641012200 |
| b2547 | yphE | fused predicted sugar transporter subunits of ABC superfamily: ATP-binding components | 2676383 | 2674872 | - | NC_000913.2 | eco_45 | 0.0000086760480 |
| b2767 | ygcO | orf, hypothetical protein | 2891941 | 2892201 | + | NC_000913.2 | eco_45 | 0.0000173521000 |
| b2875 | yqeB | conserved protein with NAD(P)-binding Rossman fold | 3012261 | 3010636 | - | NC_000913.2 | eco_45 | 0.0000000104253 |
| b2876 | b2876 | orf, hypothetical protein | 3013079 | 3012309 | - | NC_000913.2 | eco_45 | 0.0003630629000 |
| b3051 | yqiK | hypothetical protein | 3190886 | 3192547 | + | NC_000913.2 | eco_45 | 0.0000000053897 |
| b3152 | yraR | orf, hypothetical protein | 3296868 | 3296233 | - | NC_000913.2 | eco_45 | 0.0000146276900 |
| b3379 | php | predicted hydrolase | 3506612 | 3505734 | - | NC_000913.2 | eco_45 | 0.0000101385100 |
| b3382 | yhfY | orf, hypothetical protein | 3509444 | 3509082 | - | NC_000913.2 | eco_45 | 0.0000019804630 |
| b3415 | gntT | gluconate transporter, high-affinity GNT I system | 3544581 | 3545897 | + | NC_000913.2 | eco_45 | 0.0000000516060 |
| b3589 | yiaY | predicted Fe-containing alcohol dehydrogenase | 3755850 | 3754699 | - | NC_000913.2 | eco_45 | 0.0000325112300 |
| b3646 | yicG | orf, hypothetical protein | 3816897 | 3817514 | + | NC_000913.2 | eco_45 | 0.0000325112300 |
| b3684 | yidP | predicted DNA-binding transcriptional regulator | 3861922 | 3862638 | + | NC_000913.2 | eco_45 | 0.0000005320469 |
| b3801 | aslA | acrylsulfatase-like enzyme | 3984030 | 3982375 | - | NC_000913.2 | eco_45 | 0.0000033326130 |
| b3880 | yihS | orf, hypothetical protein | 4069779 | 4068538 | - | NC_000913.2 | eco_45 | 0.0000000000000 |
| b3881 | yihT | predicted aldolase | 4070674 | 4069796 | - | NC_000913.2 | eco_45 | 0.0000000000000 |
| b3882 | yihU | predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain | 4071594 | 4070698 | - | NC_000913.2 | eco_45 | 0.0000000000000 |
| b3883 | yihV | putative kinase | 4071762 | 4072658 | + | NC_000913.2 | eco_45 | 0.0000000000000 |
| b3884 | yihW | putative DEOR-type transcriptional regulator | 4072692 | 4073477 | + | NC_000913.2 | eco_45 | 0.0000000000000 |
| b3950 | frwB | predicted enzyme IIB component of PTS | 4141647 | 4141967 | + | NC_000913.2 | eco_45 | 0.0000251882300 |
| b4082 | yjcR | predicted membrane fusion protein of efflux pum | 4302132 | 4301101 | - | NC_000913.2 | eco_45 | 0.0000014818970 |
| b4090 | rpiB | ribose-5-phosphate isomerase | 4311373 | 4311822 | + | NC_000913.2 | eco_45 | 0.0000861502600 |
| b4183 | yjfK | hypothetical protein | 4409325 | 4409984 | + | NC_000913.2 | eco_45 | 0.0000028967170 |
| b4186 | yjfC | predicted synthetase/amidase | 4411051 | 4412214 | + | NC_000913.2 | eco_45 | 0.0000001432434 |
| b4192 | yjfR | orf, hypothetical protein | 4417648 | 4416584 | - | NC_000913.2 | eco_45 | 0.0000000000015 |
| b4193 | sgaT | orf, hypothetical protein | 4418003 | 4419400 | + | NC_000913.2 | eco_45 | 0.0002171377000 |
| b4264 | idnR | DNA-binding transcriptional repressor, 5-gluconate-binding | 4489162 | 4488164 | - | NC_000913.2 | eco_45 | 0.0000317963900 |
| b4265 | idnT | L-idonate and D-gluconate transporter | 4490548 | 4489229 | - | NC_000913.2 | eco_45 | 0.0002947147000 |
| b4266 | idnO | gluconate 5-dehydrogenase | 4491374 | 4490610 | - | NC_000913.2 | eco_45 | 0.0000000008247 |
| b4267 | idnD | L-idonate 5-dehydrogenase, NAD-binding | 4492429 | 4491398 | - | NC_000913.2 | eco_45 | 0.0000002626449 |
| b4268 | idnK | D-gluconate kinase, thermosensitive | 4492646 | 4493209 | + | NC_000913.2 | eco_45 | 0.0000039164250 |
| b4306 | yjhP | KpLE2 phage-like element; predicted methyltransferase | 4531206 | 4530460 | - | NC_000913.2 | eco_45 | 0.0000000686889 |
| b4358 | yjjN | predicted oxidoreductase, Zn-dependent and NAD(P)-binding | 4594013 | 4595035 | + | NC_000913.2 | eco_45 | 0.0000641012200 |
Conditions
| Condition ID | Condition Name | GRE | pval |
|---|---|---|---|
| eco_101 | GSM118615 | 43 | 0.0165163500000 |
| eco_102 | GSM118620 | 43 | 0.0296194000000 |
| eco_103 | GSM120166 | 43 | 0.0105710800000 |
| eco_11 | Clean_ANA12 | 43 | 0.0008565840000 |
| eco_113 | GSM18251 | 43 | 0.0000276939700 |
| eco_118 | GSM18260 | 43 | 0.0162402900000 |
| eco_12 | Clean_ANA13 | 43 | 0.0027072650000 |
| eco_123 | GSM18279 | 43 | 0.0291846500000 |
| eco_128 | GSM30821 | 43 | 0.0322894800000 |
| eco_137 | GSM62194 | 43 | 0.0216496700000 |
| eco_145 | GSM65626 | 43 | 0.0109650400000 |
| eco_147 | GSM65630 | 43 | 0.0027309600000 |
| eco_150 | GSM67656 | 43 | 0.0041308660000 |
| eco_151 | GSM73124 | 43 | 0.0274368800000 |
| eco_155 | GSM73139 | 43 | 0.0438308800000 |
| eco_160 | GSM73146 | 43 | 0.0261815400000 |
| eco_162 | GSM73152 | 43 | 0.0111927900000 |
| eco_164 | GSM73157 | 43 | 0.0113632200000 |
| eco_182 | GSM77343 | 43 | 0.0125225200000 |
| eco_185 | GSM77354 | 43 | 0.0146526600000 |
| eco_188 | GSM8116 | 43 | 0.0341265600000 |
| eco_192 | GSM82545 | 43 | 0.0301438600000 |
| eco_200 | GSM83060 | 43 | 0.0202150300000 |
| eco_209 | GSM88916 | 43 | 0.0385351000000 |
| eco_210 | GSM98717 | 43 | 0.0125399600000 |
| eco_211 | GSM98721 | 43 | 0.0008469898000 |
| eco_215 | GSM98732 | 43 | 0.0022877610000 |
| eco_219 | GSM99103 | 43 | 0.0017478150000 |
| eco_221 | GSM99108 | 43 | 0.0064349600000 |
| eco_224 | GSM99117 | 43 | 0.0396490700000 |
| eco_225 | GSM99119 | 43 | 0.0283962000000 |
| eco_226 | GSM99121 | 43 | 0.0482225600000 |
| eco_231 | GSM99133 | 43 | 0.0059796319000 |
| eco_235 | GSM99159 | 43 | 0.0021351660000 |
| eco_237 | GSM99164 | 43 | 0.0021982980000 |
| eco_238 | GSM99167 | 43 | 0.0122633500000 |
| eco_241 | GSM99184 | 43 | 0.0330686000000 |
| eco_242 | GSM99186 | 43 | 0.0010841570000 |
| eco_244 | GSM99191 | 43 | 0.0060571390000 |
| eco_259 | 1589 | 43 | 0.0342809600000 |
| eco_270 | Clean_ANA3 | 43 | 0.0004514613000 |
| eco_273 | Clean_H2O23 | 43 | 0.0092689420000 |
| eco_274 | Clean_H2O26 | 43 | 0.0210080700000 |
| eco_276 | cysB__G | 43 | 0.0393042300000 |
| eco_278 | EC_GLU_WILD_C | 43 | 0.0042169630000 |
| eco_279 | EC_GLY_GLY2_20_C | 43 | 0.0215142500000 |
| eco_287 | EC_LAC_LB_20_C | 43 | 0.0329682300000 |
| eco_296 | E-MEXP-267-raw-data-495080351.txt | 43 | 0.0178863600000 |
| eco_30 | cysB | 43 | 0.0009358314000 |
| eco_302 | GSM101231 | 43 | 0.0473619200000 |
| eco_307 | GSM101775 | 43 | 0.0183859300000 |
| eco_31 | EC_GLY_GLY1_20_C | 43 | 0.0000942109200 |
| eco_313 | GSM106753 | 43 | 0.0173639000000 |
| eco_316 | GSM111419 | 43 | 0.0280222800000 |
| eco_317 | GSM114370 | 43 | 0.0359723100000 |
| eco_318 | GSM114384 | 43 | 0.0047362030000 |
| eco_324 | GSM118619 | 43 | 0.0142178100000 |
| eco_33 | EC_GLY_GLY1_44_B | 43 | 0.0000146716200 |
| eco_35 | EC_GLY_GLYA_20_A | 43 | 0.0176824500000 |
| eco_352 | GSM73134 | 43 | 0.0449925600000 |
| eco_353 | GSM73137 | 43 | 0.0148743300000 |
| eco_354 | GSM73147 | 43 | 0.0283651500000 |
| eco_36 | EC_GLY_GLYA_20_C | 43 | 0.0306044000000 |
| eco_365 | GSM8113 | 43 | 0.0033656820000 |
| eco_369 | GSM82543 | 43 | 0.0264548600000 |
| eco_371 | GSM82552 | 43 | 0.0346453800000 |
| eco_373 | GSM82598 | 43 | 0.0302986500000 |
| eco_374 | GSM82604 | 43 | 0.0013897390000 |
| eco_383 | GSM88912 | 43 | 0.0297157900000 |
| eco_389 | GSM99098 | 43 | 0.0086213470000 |
| eco_392 | GSM99114 | 43 | 0.0001007542000 |
| eco_396 | GSM99143 | 43 | 0.0000469700800 |
| eco_397 | GSM99145 | 43 | 0.0228530300000 |
| eco_40 | EC_GLY_GLYC_20_B | 43 | 0.0334627900000 |
| eco_400 | GSM99157 | 43 | 0.0127083100000 |
| eco_401 | GSM99162 | 43 | 0.0400404100000 |
| eco_404 | GSM99183 | 43 | 0.0019896830000 |
| eco_405 | GSM99187 | 43 | 0.0160530600000 |
| eco_406 | GSM99192 | 43 | 0.0483657400000 |
| eco_41 | EC_GLY_GLYC_20_C | 43 | 0.0483639300000 |
| eco_410 | GSM99204 | 43 | 0.0359458700000 |
| eco_414 | GSM99398 | 43 | 0.0023969360000 |
| eco_42 | EC_GLY_GLYD_20_C | 43 | 0.0165450000000 |
| eco_424 | Clean_ANA2 | 43 | 0.0298359800000 |
| eco_431 | EC_GLY_GLY2_44_C | 43 | 0.0000946150000 |
| eco_432 | EC_GLY_GLYC_44_C | 43 | 0.0076877710000 |
| eco_434 | EC_LAC_LA_60_B | 43 | 0.0116482400000 |
| eco_44 | EC_LAC_L2_20_C | 43 | 0.0372837600000 |
| eco_443 | GADXW_exp16 | 43 | 0.0103187300000 |
| eco_453 | GSM114385 | 43 | 0.0355300600000 |
| eco_458 | GSM1382 | 43 | 0.0063782420000 |
| eco_466 | GSM37072 | 43 | 0.0197157500000 |
| eco_47 | EC_LAC_L3_60_A | 43 | 0.0093377540000 |
| eco_473 | GSM65588 | 43 | 0.0146462400000 |
| eco_475 | GSM65623 | 43 | 0.0255949200000 |
| eco_476 | GSM65628 | 43 | 0.0032604840000 |
| eco_479 | GSM67652 | 43 | 0.0349107800000 |
| eco_480 | GSM67659 | 43 | 0.0056760560000 |
| eco_482 | GSM73123 | 43 | 0.0086340660000 |
| eco_485 | GSM73156 | 43 | 0.0274177600000 |
| eco_49 | EC_LAC_LA_60_D | 43 | 0.0015147930000 |
| eco_494 | GSM77355 | 43 | 0.0296350700000 |
| eco_497 | GSM82605 | 43 | 0.0382234000000 |
| eco_498 | GSM82610 | 43 | 0.0425285900000 |
| eco_50 | EC_LAC_LB_20_B | 43 | 0.0479821000000 |
| eco_508 | GSM99092 | 43 | 0.0014334330000 |
| eco_516 | GSM99169 | 43 | 0.0453387500000 |
| eco_517 | GSM99176 | 43 | 0.0438508000000 |
| eco_520 | GSM99198 | 43 | 0.0044302410000 |
| eco_522 | GSM99213 | 43 | 0.0026705380000 |
| eco_523 | GSM99389 | 43 | 0.0011045700000 |
| eco_534 | Clean_DIAUX10 | 43 | 0.0104153500000 |
| eco_536 | Clean_H2O25 | 43 | 0.0394726300000 |
| eco_539 | crpcysB__G | 43 | 0.0334493900000 |
| eco_540 | crpfruR__G | 43 | 0.0020448670000 |
| eco_544 | EC_GLY_GLY2_44_A | 43 | 0.0096864220000 |
| eco_549 | EC_LAC_L2_20_B | 43 | 0.0280099900000 |
| eco_55 | EC_LAC_LE_60_A | 43 | 0.0027853820000 |
| eco_550 | EC_LAC_L2_60_A | 43 | 0.0101685700000 |
| eco_551 | EC_LAC_LA_60_C | 43 | 0.0184829400000 |
| eco_553 | EC_LAC_LC_20_B | 43 | 0.0021032760000 |
| eco_554 | EC_LAC_LD_20_A | 43 | 0.0191400100000 |
| eco_555 | EC_LAC_LD_60_A | 43 | 0.0320160900000 |
| eco_556 | EC_LAC_LD_60_C | 43 | 0.0303793600000 |
| eco_559 | E-MEXP-267-raw-data-495080239.txt | 43 | 0.0349117300000 |
| eco_56 | EC_LAC_LE_60_C | 43 | 0.0000003139720 |
| eco_563 | GSM101778 | 43 | 0.0022566680000 |
| eco_566 | GSM111422 | 43 | 0.0102515600000 |
| eco_568 | GSM118602 | 43 | 0.0169740100000 |
| eco_570 | GSM118618 | 43 | 0.0370078800000 |
| eco_571 | GSM120194 | 43 | 0.0465054700000 |
| eco_574 | GSM1375 | 43 | 0.0003530237000 |
| eco_583 | GSM63894 | 43 | 0.0323151000000 |
| eco_588 | GSM77349 | 43 | 0.0309762300000 |
| eco_589 | GSM77359 | 43 | 0.0000002775094 |
| eco_59 | E-MEXP-222-raw-data-386284924.txt | 43 | 0.0048550020000 |
| eco_593 | GSM83061 | 43 | 0.0270105800000 |
| eco_605 | GSM99130 | 43 | 0.0322704200000 |
| eco_611 | GSM99201 | 43 | 0.0000847569200 |
| eco_615 | GSM99399 | 43 | 0.0460229100000 |
| eco_62 | E-MEXP-222-raw-data-386285101.txt | 43 | 0.0091609160000 |
| eco_624 | Clean_TGC1 | 43 | 0.0219982100000 |
| eco_625 | EC_GLY_GLY1_44_C | 43 | 0.0001727496000 |
| eco_626 | EC_GLY_GLY2_20_B | 43 | 0.0021491780000 |
| eco_627 | EC_GLY_GLY2_44_B | 43 | 0.0000013306900 |
| eco_628 | EC_GLY_GLYB_20_A | 43 | 0.0126587500000 |
| eco_630 | EC_GLY_GLYC_44_A | 43 | 0.0471380800000 |
| eco_634 | EC_LAC_L2_20_A | 43 | 0.0323877700000 |
| eco_635 | EC_LAC_L3_20_B | 43 | 0.0192162700000 |
| eco_636 | EC_LAC_L3_60_B | 43 | 0.0037991800000 |
| eco_637 | EC_LAC_L3_60_C | 43 | 0.0261859700000 |
| eco_640 | EC_LAC_LE_60_B | 43 | 0.0349800000000 |
| eco_646 | GSM116027 | 43 | 0.0059130700000 |
| eco_649 | GSM118610 | 43 | 0.0369502100000 |
| eco_65 | E-MEXP-245-raw-data-396455365.txt | 43 | 0.0196015200000 |
| eco_650 | GSM1376 | 43 | 0.0356324800000 |
| eco_66 | E-MEXP-245-raw-data-396455381.txt | 43 | 0.0030372850000 |
| eco_668 | GSM67658 | 43 | 0.0219848500000 |
| eco_67 | E-MEXP-267-raw-data-495080207.txt | 43 | 0.0338825100000 |
| eco_673 | GSM73256 | 43 | 0.0281660900000 |
| eco_678 | GSM77356 | 43 | 0.0291896900000 |
| eco_685 | GSM83068 | 43 | 0.0090023170000 |
| eco_687 | GSM88917 | 43 | 0.0485728400000 |
| eco_689 | GSM98729 | 43 | 0.0000924899100 |
| eco_692 | GSM99097 | 43 | 0.0087751570000 |
| eco_695 | GSM99115 | 43 | 0.0080251200000 |
| eco_696 | GSM99116 | 43 | 0.0168767300000 |
| eco_701 | GSM99190 | 43 | 0.0000760412900 |
| eco_702 | GSM99202 | 43 | 0.0016909870000 |
| eco_703 | GSM99216 | 43 | 0.0208620700000 |
| eco_712 | EC_LAC_LA_20_A | 43 | 0.0016961460000 |
| eco_713 | EC_LAC_LD_20_C | 43 | 0.0077797830000 |
| eco_72 | GSM101230 | 43 | 0.0115958400000 |
| eco_73 | GSM101232 | 43 | 0.0282924200000 |
| eco_730 | GSM67655 | 43 | 0.0051775060000 |
| eco_731 | GSM67660 | 43 | 0.0164693200000 |
| eco_736 | GSM77346 | 43 | 0.0148712600000 |
| eco_74 | GSM101233 | 43 | 0.0325287900000 |
| eco_741 | GSM89486 | 43 | 0.0280477300000 |
| eco_745 | GSM99095 | 43 | 0.0088229840000 |
| eco_746 | GSM99110 | 43 | 0.0474873500000 |
| eco_748 | GSM99163 | 43 | 0.0435751500000 |
| eco_758 | EC_GLY_GLYD_44_C | 43 | 0.0435392300000 |
| eco_759 | EC_GLY_WILD_C | 43 | 0.0420998500000 |
| eco_766 | GSM116031 | 43 | 0.0067968870000 |
| eco_768 | GSM18278 | 43 | 0.0269827000000 |
| eco_771 | GSM73127 | 43 | 0.0301767600000 |
| eco_777 | GSM83059 | 43 | 0.0447925400000 |
| eco_781 | GSM99185 | 43 | 0.0000131144500 |
| eco_782 | GSM99209 | 43 | 0.0084299120000 |
| eco_786 | EC_LAC_WILD_C | 43 | 0.0056974460000 |
| eco_790 | GSM101774 | 43 | 0.0122446100000 |
| eco_797 | GSM73150 | 43 | 0.0110683600000 |
| eco_802 | GSM82620 | 43 | 0.0237200700000 |
| eco_805 | GSM99153 | 43 | 0.0163019100000 |
| eco_806 | GSM99175 | 43 | 0.0267937200000 |
| eco_807 | GSM99636 | 43 | 0.0293389400000 |
| eco_815 | GSM101770 | 43 | 0.0175327600000 |
| eco_816 | GSM106755 | 43 | 0.0003036808000 |
| eco_819 | GSM77352 | 43 | 0.0052336370000 |
| eco_826 | GSM106756 | 43 | 0.0404037700000 |
| eco_832 | GSM99168 | 43 | 0.0141616400000 |
| eco_835 | EC_GLY_GLYB_20_B | 43 | 0.0276559500000 |
| eco_837 | E-MEXP-267-raw-data-495080287.txt | 43 | 0.0073275060000 |
| eco_839 | GSM1370 | 43 | 0.0433472000000 |
| eco_84 | GSM106757 | 43 | 0.0323541000000 |
| eco_848 | GSM99639 | 43 | 0.0475929700000 |
| eco_85 | GSM106758 | 43 | 0.0276279600000 |
| eco_851 | GSM99112 | 43 | 0.0064520620000 |
| eco_852 | GSM99156 | 43 | 0.0302869400000 |
| eco_855 | GSM99161 | 43 | 0.0049065050000 |
| eco_856 | Clean_ANA20 | 43 | 0.0318605500000 |
| eco_861 | GSM99124 | 43 | 0.0300604100000 |
| eco_863 | GSM73118 | 43 | 0.0036354350000 |
| eco_864 | GSM99158 | 43 | 0.0044729440000 |
| eco_866 | GSM65601 | 43 | 0.0153083100000 |
| eco_93 | GSM114386 | 43 | 0.0019752400000 |
| eco_99 | GSM118607 | 43 | 0.0268313600000 |