Regulator IdnR
GREs
GRE ID | PSSM | Score |
---|---|---|
eco_194 | 0.0073218107539822 | |
eco_272 | 0.0032192229979419 |
Corems
Corem ID | GRE | pval |
---|---|---|
ec593697 | eco_194 | 0.0000369262600 |
ec612589 | eco_194 | 0.0000001410099 |
ec612612 | eco_194 | 0.0000006236142 |
ec544780 | eco_272 | 0.0000000000000 |
ec550226 | eco_272 | 0.0000000000230 |
ec566224 | eco_272 | 0.0000000000247 |
Genes
Gene name | Common name | Description | Start | Stop | Strand | Chromosome | GRE | pval |
---|---|---|---|---|---|---|---|---|
b3586 | yiaV | membrane fusion protein (MFP) component of efflux pump, signal anchor | 3752122 | 3750986 | - | NC_000913.2 | eco_194 | 0.0000000000019 |
b2140 | dusC | tRNA-dihydrouridine synthase | 2228407 | 2227460 | - | NC_000913.2 | eco_194 | 0.0000021893250 |
b3647 | yicF | putative enzyme | 3819193 | 3817511 | - | NC_000913.2 | eco_194 | 0.0000009011124 |
b3880 | yihS | orf, hypothetical protein | 4069779 | 4068538 | - | NC_000913.2 | eco_194 | 0.0000000000290 |
b3881 | yihT | predicted aldolase | 4070674 | 4069796 | - | NC_000913.2 | eco_194 | 0.0000000021445 |
b3882 | yihU | predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain | 4071594 | 4070698 | - | NC_000913.2 | eco_194 | 0.0000000000000 |
b3883 | yihV | putative kinase | 4071762 | 4072658 | + | NC_000913.2 | eco_194 | 0.0000000000000 |
b3884 | yihW | putative DEOR-type transcriptional regulator | 4072692 | 4073477 | + | NC_000913.2 | eco_194 | 0.0000000000192 |
b3581 | sgbH | 3-keto-L-gulonate 6-phosphate decarboxylase | 3746600 | 3747262 | + | NC_000913.2 | eco_194 | 0.0000001371595 |
b0520 | ylbF | hypothetical protein | 548850 | 549665 | + | NC_000913.2 | eco_194 | 0.0000005710705 |
b2877 | ygfJ | hypothetical protein | 3013182 | 3013760 | + | NC_000913.2 | eco_272 | 0.0000000000000 |
b2964 | nupG | transport of nucleosides, permease protein | 3103736 | 3104992 | + | NC_000913.2 | eco_272 | 0.0000082081740 |
b3566 | xylF | D-xylose transporter subun | 3729154 | 3730146 | + | NC_000913.2 | eco_272 | 0.0000012163180 |
b3597 | yibH | hypothetical protein | 3769402 | 3768266 | - | NC_000913.2 | eco_272 | 0.0000004317610 |
b4119 | melA | alpha-galactosidase, NAD(P)-binding | 4339934 | 4341289 | + | NC_000913.2 | eco_272 | 0.0000018917640 |
b4267 | idnD | L-idonate 5-dehydrogenase, NAD-binding | 4492429 | 4491398 | - | NC_000913.2 | eco_272 | 0.0000003724408 |
b1060 | yceP | orf, hypothetical protein | 1120178 | 1119924 | - | NC_000913.2 | eco_272 | 0.0000008442431 |
b1462 | b1462 | orf, hypothetical protein | 1531875 | 1531306 | - | NC_000913.2 | eco_272 | 0.0000010464070 |
b1512 | lsrR | lsr operon transcriptional repressor | 1599265 | 1598312 | - | NC_000913.2 | eco_272 | 0.0000016267610 |
b1513 | lsrA | fused AI2 transporter subunits of ABC superfamily: ATP-binding components | 1599514 | 1601049 | + | NC_000913.2 | eco_272 | 0.0000162315700 |
b1515 | lsrD | AI2 transporter | 1602071 | 1603063 | + | NC_000913.2 | eco_272 | 0.0000014374660 |
b1901 | araF | L-arabinose transporter subun | 1984152 | 1983163 | - | NC_000913.2 | eco_272 | 0.0000041812730 |
b2841 | araE | arabinose transporter | 2980204 | 2978786 | - | NC_000913.2 | eco_272 | 0.0000000020809 |
b2875 | yqeB | conserved protein with NAD(P)-binding Rossman fold | 3012261 | 3010636 | - | NC_000913.2 | eco_272 | 0.0000000006008 |
b2876 | b2876 | orf, hypothetical protein | 3013079 | 3012309 | - | NC_000913.2 | eco_272 | 0.0000000000000 |
Conditions
Condition ID | Condition Name | GRE | pval |
---|---|---|---|
eco_101 | GSM118615 | 169 | 0.0084183650000 |
eco_103 | GSM120166 | 169 | 0.0199095800000 |
eco_110 | GSM1380 | 169 | 0.0413052300000 |
eco_113 | GSM18251 | 169 | 0.0090486790000 |
eco_116 | GSM18256 | 235 | 0.0191814700000 |
eco_118 | GSM18260 | 169 | 0.0162402900000 |
eco_12 | Clean_ANA13 | 235 | 0.0465651000000 |
eco_123 | GSM18279 | 169 | 0.0021987990000 |
eco_129 | GSM35417 | 235 | 0.0001596771000 |
eco_130 | GSM37067 | 235 | 0.0045355140000 |
eco_134 | GSM37077 | 235 | 0.0353946100000 |
eco_135 | GSM37886 | 169 | 0.0418009300000 |
eco_137 | GSM62194 | 169 | 0.0373389400000 |
eco_139 | GSM62199 | 169 | 0.0315714400000 |
eco_140 | GSM63887 | 235 | 0.0497755400000 |
eco_148 | GSM65641 | 169 | 0.0246440900000 |
eco_150 | GSM67656 | 169 | 0.0062034110000 |
eco_151 | GSM73124 | 235 | 0.0084648280000 |
eco_154 | GSM73138 | 169 | 0.0015665820000 |
eco_159 | GSM73145 | 235 | 0.0041454200000 |
eco_160 | GSM73146 | 169 | 0.0267205000000 |
eco_161 | GSM73151 | 169 | 0.0131537800000 |
eco_162 | GSM73152 | 169 | 0.0000601535200 |
eco_163 | GSM73155 | 169 | 0.0139821600000 |
eco_164 | GSM73157 | 169 | 0.0241939900000 |
eco_167 | GSM73160 | 169 | 0.0354715000000 |
eco_168 | GSM73257 | 235 | 0.0078810980000 |
eco_170 | GSM73263 | 235 | 0.0414647900000 |
eco_172 | GSM73265 | 235 | 0.0208244400000 |
eco_173 | GSM73270 | 235 | 0.0381482800000 |
eco_174 | GSM73271 | 235 | 0.0136458400000 |
eco_174 | GSM73271 | 169 | 0.0014916720000 |
eco_175 | GSM73272 | 235 | 0.0144748500000 |
eco_176 | GSM73276 | 235 | 0.0200230900000 |
eco_178 | GSM73283 | 235 | 0.0001122946000 |
eco_181 | GSM77341 | 235 | 0.0017824530000 |
eco_182 | GSM77343 | 169 | 0.0169777000000 |
eco_188 | GSM8116 | 235 | 0.0396770000000 |
eco_188 | GSM8116 | 169 | 0.0314918000000 |
eco_19 | Clean_DIAUX7 | 235 | 0.0362454800000 |
eco_191 | GSM82542 | 169 | 0.0056784880000 |
eco_193 | GSM82548 | 169 | 0.0448364000000 |
eco_193 | GSM82548 | 235 | 0.0037039520000 |
eco_194 | GSM82551 | 235 | 0.0108794200000 |
eco_198 | GSM83055 | 235 | 0.0452796000000 |
eco_200 | GSM83060 | 169 | 0.0204454200000 |
eco_202 | GSM83065 | 169 | 0.0008866258000 |
eco_204 | GSM83071 | 235 | 0.0410877800000 |
eco_209 | GSM88916 | 235 | 0.0121868700000 |
eco_21 | Clean_H2O211 | 169 | 0.0255662200000 |
eco_21 | Clean_H2O211 | 235 | 0.0103456300000 |
eco_210 | GSM98717 | 235 | 0.0389377900000 |
eco_210 | GSM98717 | 169 | 0.0255849700000 |
eco_211 | GSM98721 | 169 | 0.0298475900000 |
eco_214 | GSM98727 | 169 | 0.0047033950000 |
eco_215 | GSM98732 | 235 | 0.0396022700000 |
eco_215 | GSM98732 | 169 | 0.0103777700000 |
eco_220 | GSM99107 | 169 | 0.0258938800000 |
eco_224 | GSM99117 | 169 | 0.0080631630000 |
eco_225 | GSM99119 | 169 | 0.0249540300000 |
eco_228 | GSM99128 | 169 | 0.0260784300000 |
eco_229 | GSM99129 | 169 | 0.0474591900000 |
eco_230 | GSM99132 | 169 | 0.0329834800000 |
eco_230 | GSM99132 | 235 | 0.0456757300000 |
eco_231 | GSM99133 | 169 | 0.0241431076000 |
eco_232 | GSM99136 | 235 | 0.0464163900000 |
eco_233 | GSM99150 | 235 | 0.0029682660000 |
eco_233 | GSM99150 | 169 | 0.0000752384300 |
eco_235 | GSM99159 | 169 | 0.0419978400000 |
eco_237 | GSM99164 | 169 | 0.0263718500000 |
eco_24 | Clean_H2O27 | 235 | 0.0257160300000 |
eco_240 | GSM99181 | 235 | 0.0320458200000 |
eco_241 | GSM99184 | 235 | 0.0007289883000 |
eco_245 | GSM99196 | 169 | 0.0406766400000 |
eco_246 | GSM99197 | 169 | 0.0023873230000 |
eco_247 | GSM99203 | 169 | 0.0262506800000 |
eco_248 | GSM99205 | 169 | 0.0074159010000 |
eco_25 | Clean_TGC10 | 235 | 0.0299170300000 |
eco_250 | GSM99215 | 169 | 0.0497437300000 |
eco_263 | 1639 | 235 | 0.0495181900000 |
eco_264 | 1644 | 235 | 0.0394632500000 |
eco_269 | ANAEROBIC_CH | 235 | 0.0115620700000 |
eco_270 | Clean_ANA3 | 235 | 0.0059716780000 |
eco_273 | Clean_H2O23 | 169 | 0.0311119000000 |
eco_273 | Clean_H2O23 | 235 | 0.0422209000000 |
eco_275 | Clean_H2O28 | 235 | 0.0415749900000 |
eco_28 | Clean_TGC2 | 235 | 0.0489308400000 |
eco_283 | EC_GLY_GLYE_44_B | 169 | 0.0003890669000 |
eco_286 | EC_LAC_LB_20_A | 169 | 0.0275132900000 |
eco_286 | EC_LAC_LB_20_A | 235 | 0.0118058200000 |
eco_293 | E-MEXP-244-raw-data-396455098.txt | 235 | 0.0022177390000 |
eco_296 | E-MEXP-267-raw-data-495080351.txt | 235 | 0.0444067000000 |
eco_297 | E-MEXP-267-raw-data-495080367.txt | 169 | 0.0214858800000 |
eco_300 | GADXW_exp8 | 235 | 0.0060453600000 |
eco_302 | GSM101231 | 235 | 0.0491904300000 |
eco_304 | GSM101237 | 169 | 0.0316369500000 |
eco_305 | GSM101241 | 169 | 0.0391019900000 |
eco_306 | GSM101242 | 235 | 0.0460639800000 |
eco_308 | GSM101777 | 235 | 0.0098891930000 |
eco_311 | GSM106340 | 235 | 0.0003347352000 |
eco_318 | GSM114384 | 169 | 0.0154900600000 |
eco_32 | EC_GLY_GLY1_44_A | 169 | 0.0049671350000 |
eco_320 | GSM116030 | 169 | 0.0298210000000 |
eco_325 | GSM118621 | 235 | 0.0006365581000 |
eco_327 | GSM1367 | 235 | 0.0394269300000 |
eco_328 | GSM1372 | 235 | 0.0242777900000 |
eco_33 | EC_GLY_GLY1_44_B | 169 | 0.0049949010000 |
eco_33 | EC_GLY_GLY1_44_B | 235 | 0.0067859840000 |
eco_330 | GSM1378 | 235 | 0.0391088700000 |
eco_339 | GSM23465 | 235 | 0.0232187600000 |
eco_341 | GSM37064 | 235 | 0.0446255300000 |
eco_350 | GSM73120 | 235 | 0.0167569200000 |
eco_351 | GSM73122 | 235 | 0.0322544700000 |
eco_352 | GSM73134 | 235 | 0.0319623900000 |
eco_353 | GSM73137 | 169 | 0.0007697214000 |
eco_355 | GSM73255 | 235 | 0.0396349700000 |
eco_357 | GSM73262 | 235 | 0.0386584000000 |
eco_360 | GSM73273 | 235 | 0.0378968100000 |
eco_361 | GSM73281 | 235 | 0.0022614910000 |
eco_365 | GSM8113 | 169 | 0.0329386200000 |
eco_366 | GSM8115 | 235 | 0.0095761650000 |
eco_371 | GSM82552 | 169 | 0.0146608600000 |
eco_372 | GSM82553 | 235 | 0.0192423800000 |
eco_372 | GSM82553 | 169 | 0.0133638300000 |
eco_374 | GSM82604 | 169 | 0.0109343600000 |
eco_375 | GSM82606 | 235 | 0.0234662200000 |
eco_381 | GSM83081 | 169 | 0.0318980400000 |
eco_382 | GSM83083 | 235 | 0.0019974320000 |
eco_384 | GSM94005 | 235 | 0.0397830900000 |
eco_387 | GSM99084 | 169 | 0.0214331800000 |
eco_391 | GSM99105 | 235 | 0.0135782600000 |
eco_396 | GSM99143 | 235 | 0.0369660500000 |
eco_399 | GSM99149 | 235 | 0.0027485320000 |
eco_40 | EC_GLY_GLYC_20_B | 169 | 0.0123391600000 |
eco_405 | GSM99187 | 169 | 0.0146944500000 |
eco_406 | GSM99192 | 235 | 0.0289972200000 |
eco_406 | GSM99192 | 169 | 0.0206118000000 |
eco_409 | GSM99200 | 169 | 0.0283742400000 |
eco_410 | GSM99204 | 235 | 0.0450959400000 |
eco_422 | 5273 | 235 | 0.0382042200000 |
eco_427 | Clean_TGC6 | 235 | 0.0286809300000 |
eco_428 | Clean_TGC8 | 235 | 0.0212679600000 |
eco_430 | EC_GLY_GLY1_20_A | 169 | 0.0008661593000 |
eco_432 | EC_GLY_GLYC_44_C | 169 | 0.0043282250000 |
eco_432 | EC_GLY_GLYC_44_C | 235 | 0.0186521300000 |
eco_435 | EC_LAC_LC_20_C | 235 | 0.0230428600000 |
eco_45 | EC_LAC_L2_60_B | 235 | 0.0406302500000 |
eco_46 | EC_LAC_L2_60_C | 235 | 0.0046049270000 |
eco_46 | EC_LAC_L2_60_C | 169 | 0.0462762500000 |
eco_466 | GSM37072 | 235 | 0.0340853600000 |
eco_47 | EC_LAC_L3_60_A | 235 | 0.0360207000000 |
eco_47 | EC_LAC_L3_60_A | 169 | 0.0079017400000 |
eco_470 | GSM38548 | 169 | 0.0035814320000 |
eco_472 | GSM63896 | 169 | 0.0112924500000 |
eco_475 | GSM65623 | 169 | 0.0236089600000 |
eco_476 | GSM65628 | 235 | 0.0428566500000 |
eco_48 | EC_LAC_LA_60_A | 169 | 0.0011180570000 |
eco_480 | GSM67659 | 235 | 0.0169468700000 |
eco_482 | GSM73123 | 169 | 0.0026059830000 |
eco_485 | GSM73156 | 235 | 0.0381795600000 |
eco_486 | GSM73261 | 235 | 0.0215425800000 |
eco_488 | GSM73279 | 235 | 0.0005581082000 |
eco_49 | EC_LAC_LA_60_D | 235 | 0.0182609400000 |
eco_494 | GSM77355 | 235 | 0.0404009800000 |
eco_496 | GSM82600 | 169 | 0.0301875600000 |
eco_497 | GSM82605 | 169 | 0.0087983670000 |
eco_503 | GSM98725 | 235 | 0.0305683100000 |
eco_505 | GSM99083 | 235 | 0.0127892200000 |
eco_507 | GSM99088 | 169 | 0.0482257200000 |
eco_509 | GSM99099 | 169 | 0.0084676930000 |
eco_511 | GSM99104 | 169 | 0.0318000700000 |
eco_515 | GSM99142 | 235 | 0.0251646900000 |
eco_519 | GSM99194 | 169 | 0.0070969370000 |
eco_523 | GSM99389 | 169 | 0.0024633330000 |
eco_524 | GSM99394 | 169 | 0.0439692400000 |
eco_526 | STATIONARYPHASE_CH | 235 | 0.0159467400000 |
eco_531 | 1585 | 235 | 0.0089898260000 |
eco_534 | Clean_DIAUX10 | 169 | 0.0375423600000 |
eco_537 | Clean_TGC5 | 235 | 0.0269937600000 |
eco_54 | EC_LAC_LE_20_C | 235 | 0.0165951400000 |
eco_540 | crpfruR__G | 235 | 0.0356016000000 |
eco_541 | crpfur__G | 169 | 0.0092866330000 |
eco_546 | EC_GLY_GLYD_44_B | 169 | 0.0052923580000 |
eco_55 | EC_LAC_LE_60_A | 235 | 0.0287814600000 |
eco_550 | EC_LAC_L2_60_A | 235 | 0.0331319600000 |
eco_550 | EC_LAC_L2_60_A | 169 | 0.0221622100000 |
eco_551 | EC_LAC_LA_60_C | 235 | 0.0179972000000 |
eco_551 | EC_LAC_LA_60_C | 169 | 0.0494134700000 |
eco_552 | EC_LAC_LB_60_A | 235 | 0.0150274800000 |
eco_552 | EC_LAC_LB_60_A | 169 | 0.0362171400000 |
eco_555 | EC_LAC_LD_60_A | 169 | 0.0419910000000 |
eco_557 | E-MEXP-245-raw-data-396455349.txt | 235 | 0.0357594200000 |
eco_558 | E-MEXP-267-raw-data-495080223.txt | 235 | 0.0117554400000 |
eco_558 | E-MEXP-267-raw-data-495080223.txt | 169 | 0.0089768220000 |
eco_559 | E-MEXP-267-raw-data-495080239.txt | 235 | 0.0417136700000 |
eco_561 | E-MEXP-267-raw-data-495080319.txt | 235 | 0.0348343700000 |
eco_563 | GSM101778 | 169 | 0.0306801900000 |
eco_564 | GSM101780 | 169 | 0.0449864700000 |
eco_566 | GSM111422 | 235 | 0.0102172600000 |
eco_569 | GSM118616 | 235 | 0.0079462150000 |
eco_57 | EC_LAC_WILD_E | 169 | 0.0066172140000 |
eco_571 | GSM120194 | 235 | 0.0076247610000 |
eco_584 | GSM73121 | 235 | 0.0330792100000 |
eco_584 | GSM73121 | 169 | 0.0207155400000 |
eco_585 | GSM73132 | 235 | 0.0037794510000 |
eco_589 | GSM77359 | 169 | 0.0443039900000 |
eco_592 | GSM83056 | 235 | 0.0463538400000 |
eco_595 | GSM83070 | 235 | 0.0029776260000 |
eco_596 | GSM83076 | 235 | 0.0415987600000 |
eco_605 | GSM99130 | 235 | 0.0404266200000 |
eco_61 | E-MEXP-222-raw-data-386285038.txt | 169 | 0.0241304700000 |
eco_610 | GSM99174 | 169 | 0.0201554000000 |
eco_611 | GSM99201 | 169 | 0.0288111600000 |
eco_623 | Clean_H2O21 | 235 | 0.0488772700000 |
eco_625 | EC_GLY_GLY1_44_C | 169 | 0.0069372140000 |
eco_63 | E-MEXP-244-raw-data-396455082.txt | 169 | 0.0445041500000 |
eco_634 | EC_LAC_L2_20_A | 235 | 0.0121081900000 |
eco_636 | EC_LAC_L3_60_B | 169 | 0.0377978000000 |
eco_638 | EC_LAC_LB_60_B | 169 | 0.0491793800000 |
eco_640 | EC_LAC_LE_60_B | 235 | 0.0112062400000 |
eco_644 | GSM101776 | 235 | 0.0456835300000 |
eco_658 | GSM30823 | 235 | 0.0094172480000 |
eco_659 | GSM37066 | 235 | 0.0137977800000 |
eco_673 | GSM73256 | 235 | 0.0159108800000 |
eco_675 | GSM73274 | 169 | 0.0164434300000 |
eco_676 | GSM73275 | 235 | 0.0424559600000 |
eco_677 | GSM73280 | 235 | 0.0294059200000 |
eco_678 | GSM77356 | 235 | 0.0291896900000 |
eco_680 | GSM8114 | 235 | 0.0482808900000 |
eco_696 | GSM99116 | 169 | 0.0169329600000 |
eco_706 | 1912 | 169 | 0.0096091900000 |
eco_708 | Clean_ANA9 | 235 | 0.0386847200000 |
eco_71 | GADXW_exp6 | 235 | 0.0386277400000 |
eco_719 | GSM120196 | 169 | 0.0137547400000 |
eco_724 | GSM35419 | 169 | 0.0273923800000 |
eco_725 | GSM37065 | 235 | 0.0372476300000 |
eco_73 | GSM101232 | 169 | 0.0402546200000 |
eco_733 | GSM73142 | 235 | 0.0396179700000 |
eco_735 | GSM73278 | 235 | 0.0280273500000 |
eco_74 | GSM101233 | 169 | 0.0072438270000 |
eco_743 | GSM98722 | 235 | 0.0451938300000 |
eco_745 | GSM99095 | 235 | 0.0135261100000 |
eco_746 | GSM99110 | 169 | 0.0056625280000 |
eco_748 | GSM99163 | 235 | 0.0296689400000 |
eco_751 | GSM99180 | 235 | 0.0129549100000 |
eco_752 | GSM99182 | 169 | 0.0110132400000 |
eco_754 | Clean_ANA17 | 235 | 0.0177951200000 |
eco_754 | Clean_ANA17 | 169 | 0.0485884100000 |
eco_757 | EC_GLY_GLYC_44_B | 235 | 0.0068951790000 |
eco_761 | EC_LAC_WILD_A | 235 | 0.0324986700000 |
eco_764 | GSM101243 | 169 | 0.0121859100000 |
eco_766 | GSM116031 | 169 | 0.0352337800000 |
eco_771 | GSM73127 | 235 | 0.0254718600000 |
eco_773 | GSM73153 | 235 | 0.0083921770000 |
eco_779 | GSM99127 | 169 | 0.0162257200000 |
eco_788 | GSM101238 | 169 | 0.0178267300000 |
eco_79 | GSM101771 | 169 | 0.0142893900000 |
eco_802 | GSM82620 | 169 | 0.0399026700000 |
eco_809 | 1287 | 235 | 0.0322823300000 |
eco_811 | Clean_DIAUX17 | 235 | 0.0243607100000 |
eco_816 | GSM106755 | 169 | 0.0000549246000 |
eco_818 | GSM73129 | 235 | 0.0478913200000 |
eco_821 | GSM99146 | 169 | 0.0177347000000 |
eco_84 | GSM106757 | 169 | 0.0455459200000 |
eco_844 | GSM99214 | 235 | 0.0119557700000 |
eco_857 | EC_LAC_LC_60_C | 169 | 0.0078830200000 |
eco_86 | GSM111413 | 169 | 0.0309017100000 |
eco_860 | GSM82549 | 169 | 0.0216907100000 |
eco_863 | GSM73118 | 169 | 0.0205245700000 |
eco_868 | GSM73286 | 235 | 0.0046958730000 |
eco_88 | GSM111417 | 169 | 0.0009046704000 |
eco_88 | GSM111417 | 235 | 0.0007849107000 |
eco_89 | GSM111420 | 235 | 0.0019903570000 |
eco_91 | GSM111424 | 169 | 0.0061555960000 |
eco_93 | GSM114386 | 169 | 0.0073167710000 |
eco_95 | GSM116024 | 169 | 0.0411627700000 |