Regulator IscR

GREs

GRE ID PSSM Score
eco_169 0.0072162349950057
eco_185 0.0000000000000000

Corems

Corem ID GRE pval
ec519630 eco_169 0.0000000000225
ec524775 eco_169 0.0000412159100
ec528619 eco_169 0.0000000013598
ec528622 eco_169 0.0000228764600
ec528626 eco_169 0.0000000094325
ec528631 eco_169 0.0000002448303
ec529321 eco_169 0.0000000000000
ec535079 eco_169 0.0000000000000
ec536158 eco_169 0.0000264381000
ec538659 eco_169 0.0000016109070
ec552920 eco_185 0.0000362387800

Genes

Gene name Common name Description Start Stop Strand Chromosome GRE pval
b0186 ldcC lysine decarboxylase 2, constitutive 209679 211820 + NC_000913.2 eco_169 0.0000000000000
b0581 ybdK gamma-glutamyl:cysteine ligase 606606 605488 - NC_000913.2 eco_169 0.0000115363400
b0677 nagA N-acetylglucosamine-6-phosphate deacetylase 701974 700826 - NC_000913.2 eco_169 0.0000002852839
b0756 galM galactose-1-epimerase (mutarotase) 788060 787020 - NC_000913.2 eco_169 0.0000040210290
b0839 dacC D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a) 879950 881152 + NC_000913.2 eco_169 0.0000000002470
b1103 ycfF orf, hypothetical protein 1161108 1161467 + NC_000913.2 eco_169 0.0000003229526
b1327 ycjY predicted hydrolase 1389877 1388957 - NC_000913.2 eco_169 0.0000000007382
b1341 b1341 orf, hypothetical protein 1405819 1404587 - NC_000913.2 eco_169 0.0000022413440
b1342 ydaN zinc transporter 1406074 1407057 + NC_000913.2 eco_169 0.0000006414196
b1399 paaX DNA-binding transcriptional repressor of phenylacetic acid degradation, aryl-CoA responsive 1461563 1462513 + NC_000913.2 eco_169 0.0000000000000
b1400 paaY predicted hexapeptide repeat acetyltransferase 1462495 1463085 + NC_000913.2 eco_169 0.0000004072895
b1414 ydcF hypothetical protein 1485259 1486059 + NC_000913.2 eco_169 0.0000001069815
b1428 ydcK predicted enzyme 1498473 1497493 - NC_000913.2 eco_169 0.0000001017387
b1450 b1450 orf, hypothetical protein 1518286 1518951 + NC_000913.2 eco_169 0.0000000071004
b1585 ynfC orf, hypothetical protein 1655481 1654771 - NC_000913.2 eco_169 0.0000000000000
b1586 b1586 orf, hypothetical protein 1655589 1655894 + NC_000913.2 eco_169 0.0000000000000
b1614 ydgA hypothetical protein 1687876 1689384 + NC_000913.2 eco_169 0.0000000000000
b1664 ydhQ hypothetical protein 1744151 1742895 - NC_000913.2 eco_169 0.0000002796558
b1675 ydhZ hypothetical protein 1753165 1752956 - NC_000913.2 eco_169 0.0000012110720
b1679 sufE cysteine desufuration protein SufE 1757314 1756898 - NC_000913.2 eco_169 0.0000000000003
b1703 ydiA hypothetical protein 1785469 1786302 + NC_000913.2 eco_169 0.0000000009748
b1710 btuE predicted glutathione peroxidase 1792133 1791582 - NC_000913.2 eco_169 0.0000054661020
b1927 amyA cytoplasmic alpha-amylase 2004180 2005667 + NC_000913.2 eco_169 0.0000007180410
b1953 b1953 orf, hypothetical protein 2023010 2023237 + NC_000913.2 eco_169 0.0001464724000
b1990 erfK conserved protein with NAD(P)-binding Rossmann-fold domain 2061347 2060415 - NC_000913.2 eco_169 0.0000000000053
b2301 yfcF predicted enzyme 2418507 2417863 - NC_000913.2 eco_169 0.0000017222040
b2602 yfiL orf, hypothetical protein 2739382 2739747 + NC_000913.2 eco_169 0.0000000607969
b2665 ygaU hypothetical protein 2794808 2794359 - NC_000913.2 eco_169 0.0000281298900
b2666 yqaE predicted membrane protein 2795050 2794892 - NC_000913.2 eco_169 0.0000235519500
b3100 yqjK hypothetical protein 3248099 3248398 + NC_000913.2 eco_169 0.0000000000000
b3234 degQ serine endoprotease, periplasmic 3378765 3380132 + NC_000913.2 eco_169 0.0000003148128
b3291 mscL large-conductance mechanosensitive channe 3436046 3436456 + NC_000913.2 eco_169 0.0000015403850
b3474 yhhT orf, hypothetical protein 3609888 3610937 + NC_000913.2 eco_169 0.0000103756700
b4127 yjdJ predicted acyltransferase with acyl-CoA N-acyltransferase domain 4350108 4350380 + NC_000913.2 eco_169 0.0000031363080
b4214 cysQ PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase 4434778 4435518 + NC_000913.2 eco_169 0.0000000000450
b0357 yaiN putative alpha helix chain 379105 378830 - NC_000913.2 eco_185 0.0000002935606
b0993 torS sensor protein torS (regulator TorR) 1055401 1052657 - NC_000913.2 eco_185 0.0000000509395
b0994 torT periplasmic sensory protein associated with the TorRS two-component regulatory system 1055484 1056512 + NC_000913.2 eco_185 0.0000000575981
b1771 ydjG predicted oxidoreductase 1853995 1853015 - NC_000913.2 eco_185 0.0000063363240
b2629 yfjM CP4-57 prophage; predicted protein 2763798 2763535 - NC_000913.2 eco_185 0.0000000000000
b2630 yfjN CP4-57 prophage; RNase LS 2763940 2765013 + NC_000913.2 eco_185 0.0000000000000
b2631 yfjO orf, hypothetical protein 2765006 2765377 + NC_000913.2 eco_185 0.0000000000000
b3954 yijO predicted DNA-binding transcriptional regulator 4146340 4145489 - NC_000913.2 eco_185 0.0001810723000

Conditions

Condition ID Condition Name GRE pval
eco_10 8455 146 0.0026532790000
eco_101 GSM118615 160 0.0312267400000
eco_101 GSM118615 146 0.0352336500000
eco_102 GSM118620 160 0.0133818400000
eco_104 GSM120192 160 0.0325240600000
eco_105 GSM120193 146 0.0293284000000
eco_106 GSM1371 160 0.0422321000000
eco_107 GSM137283 160 0.0057936470000
eco_11 Clean_ANA12 160 0.0076981150000
eco_110 GSM1380 146 0.0482826200000
eco_111 GSM18235 160 0.0118286900000
eco_114 GSM18252 160 0.0357286400000
eco_115 GSM18255 146 0.0493560200000
eco_116 GSM18256 160 0.0000109677300
eco_118 GSM18260 160 0.0037238090000
eco_119 GSM18262 160 0.0300826600000
eco_123 GSM18279 146 0.0162046600000
eco_124 GSM18285 146 0.0131518900000
eco_125 GSM30815 160 0.0083688950000
eco_127 GSM30820 160 0.0086838400000
eco_131 GSM37069 146 0.0044548550000
eco_133 GSM37075 146 0.0003097155000
eco_134 GSM37077 146 0.0010976410000
eco_135 GSM37886 160 0.0418009300000
eco_136 GSM38547 146 0.0458451500000
eco_137 GSM62194 146 0.0149826600000
eco_141 GSM63889 160 0.0300674000000
eco_145 GSM65626 160 0.0396250800000
eco_147 GSM65630 146 0.0342141400000
eco_15 Clean_DIAUX11 160 0.0004824783000
eco_15 Clean_DIAUX11 146 0.0398985800000
eco_153 GSM73130 146 0.0475360600000
eco_156 GSM73140 146 0.0447316300000
eco_161 GSM73151 160 0.0402724200000
eco_164 GSM73157 146 0.0268326300000
eco_165 GSM73158 146 0.0036293320000
eco_165 GSM73158 160 0.0278863400000
eco_169 GSM73258 146 0.0058929030000
eco_17 Clean_DIAUX13 146 0.0473565600000
eco_170 GSM73263 160 0.0003827444000
eco_170 GSM73263 146 0.0365119100000
eco_175 GSM73272 160 0.0314914200000
eco_177 GSM73277 160 0.0432960100000
eco_181 GSM77341 160 0.0062990880000
eco_183 GSM77351 160 0.0127660100000
eco_187 GSM7886 146 0.0352006600000
eco_190 GSM8120 160 0.0077565880000
eco_193 GSM82548 146 0.0170558200000
eco_194 GSM82551 146 0.0387663100000
eco_195 GSM82603 160 0.0360316800000
eco_195 GSM82603 146 0.0403295500000
eco_20 Clean_H2O210 160 0.0311957300000
eco_200 GSM83060 146 0.0083603160000
eco_204 GSM83071 146 0.0337839700000
eco_21 Clean_H2O211 146 0.0103456300000
eco_212 GSM98723 146 0.0160961300000
eco_216 GSM99090 160 0.0007292568000
eco_216 GSM99090 146 0.0429420400000
eco_22 Clean_H2O22 160 0.0272468400000
eco_227 GSM99122 146 0.0161289900000
eco_23 Clean_H2O24 146 0.0349963400000
eco_230 GSM99132 146 0.0366229100000
eco_234 GSM99152 160 0.0166263700000
eco_235 GSM99159 146 0.0483638100000
eco_235 GSM99159 160 0.0120527600000
eco_236 GSM99160 160 0.0082432520000
eco_237 GSM99164 146 0.0023051730000
eco_238 GSM99167 160 0.0003046851000
eco_241 GSM99184 160 0.0445718700000
eco_244 GSM99191 146 0.0371855100000
eco_247 GSM99203 146 0.0300721200000
eco_251 GSM99384 146 0.0457702800000
eco_253 GSM99393 146 0.0148293400000
eco_254 GSM99395 146 0.0411185000000
eco_256 GSM99401 146 0.0109586700000
eco_263 1639 146 0.0424987400000
eco_272 Clean_DIAUX9 146 0.0068305650000
eco_273 Clean_H2O23 160 0.0311119000000
eco_276 cysB__G 146 0.0393042300000
eco_28 Clean_TGC2 160 0.0096776910000
eco_28 Clean_TGC2 146 0.0127971100000
eco_283 EC_GLY_GLYE_44_B 146 0.0137453100000
eco_288 EC_LAC_LD_20_B 160 0.0357562100000
eco_289 EC_LAC_LE_20_B 146 0.0195281000000
eco_290 EC_LAC_WILD_D 146 0.0490369600000
eco_293 E-MEXP-244-raw-data-396455098.txt 146 0.0441669500000
eco_295 E-MEXP-267-raw-data-495080191.txt 146 0.0248533800000
eco_298 fur 160 0.0292721200000
eco_299 GADXW_exp7 160 0.0038124850000
eco_299 GADXW_exp7 146 0.0180293100000
eco_31 EC_GLY_GLY1_20_C 160 0.0305307300000
eco_31 EC_GLY_GLY1_20_C 146 0.0358774800000
eco_312 GSM106504 146 0.0260866000000
eco_314 GSM106759 146 0.0309213900000
eco_321 GSM118611 160 0.0121637900000
eco_324 GSM118619 146 0.0006817594000
eco_337 GSM18281 160 0.0009729770000
eco_341 GSM37064 146 0.0374330900000
eco_343 GSM38549 160 0.0458431100000
eco_344 GSM62196 146 0.0354110000000
eco_35 EC_GLY_GLYA_20_A 160 0.0176824500000
eco_351 GSM73122 146 0.0239896200000
eco_352 GSM73134 146 0.0252316800000
eco_355 GSM73255 160 0.0293954100000
eco_355 GSM73255 146 0.0105682600000
eco_357 GSM73262 146 0.0317223100000
eco_358 GSM73266 146 0.0216500200000
eco_36 EC_GLY_GLYA_20_C 160 0.0070507360000
eco_361 GSM73281 146 0.0004771304000
eco_364 GSM77360 146 0.0446819200000
eco_365 GSM8113 146 0.0372695800000
eco_366 GSM8115 146 0.0387128300000
eco_373 GSM82598 146 0.0001155233000
eco_376 GSM83053 160 0.0186519900000
eco_377 GSM83057 160 0.0011464920000
eco_38 EC_GLY_GLYA_44_C 146 0.0133596600000
eco_382 GSM83083 160 0.0281887900000
eco_383 GSM88912 160 0.0285388300000
eco_386 GSM98731 160 0.0364830400000
eco_387 GSM99084 146 0.0255176000000
eco_389 GSM99098 146 0.0247227000000
eco_391 GSM99105 146 0.0426539500000
eco_396 GSM99143 146 0.0309990700000
eco_396 GSM99143 160 0.0257240600000
eco_398 GSM99148 160 0.0375248100000
eco_4 1597 160 0.0114431900000
eco_401 GSM99162 160 0.0016358220000
eco_402 GSM99166 160 0.0454118800000
eco_407 GSM99193 146 0.0195837800000
eco_409 GSM99200 146 0.0020248340000
eco_414 GSM99398 146 0.0223413200000
eco_415 GSM99400 146 0.0282823600000
eco_416 1290 146 0.0373492200000
eco_417 14829 146 0.0249947700000
eco_418 14831 146 0.0083862650000
eco_419 1637 160 0.0199627600000
eco_426 Clean_TGC16 146 0.0192021500000
eco_429 crpcysB 146 0.0001356020000
eco_43 EC_GLY_WILD_D 160 0.0132725600000
eco_430 EC_GLY_GLY1_20_A 160 0.0136855000000
eco_439 GADXW_exp1 160 0.0357781900000
eco_439 GADXW_exp1 146 0.0417158300000
eco_44 EC_LAC_L2_20_C 160 0.0453766600000
eco_440 GADXW_exp11 146 0.0001747313000
eco_440 GADXW_exp11 160 0.0037177640000
eco_442 GADXW_exp15 146 0.0051761820000
eco_444 GSM101767 146 0.0007204476000
eco_453 GSM114385 160 0.0018502110000
eco_461 GSM18284 160 0.0012616580000
eco_463 GSM30819 146 0.0365565000000
eco_465 GSM37068 146 0.0273291900000
eco_467 GSM37074 146 0.0304857600000
eco_468 GSM37885 146 0.0293638700000
eco_475 GSM65623 146 0.0273056600000
eco_476 GSM65628 160 0.0317781100000
eco_479 GSM67652 160 0.0172476400000
eco_481 GSM73119 146 0.0400453500000
eco_483 GSM73136 160 0.0360468100000
eco_484 GSM73154 146 0.0123896200000
eco_485 GSM73156 160 0.0081516300000
eco_485 GSM73156 146 0.0110209100000
eco_487 GSM73268 160 0.0198430900000
eco_488 GSM73279 146 0.0491318600000
eco_489 GSM73282 146 0.0471840500000
eco_497 GSM82605 146 0.0118005700000
eco_497 GSM82605 160 0.0087983670000
eco_498 GSM82610 160 0.0192347700000
eco_500 GSM88913 160 0.0444958900000
eco_504 GSM98728 146 0.0373850200000
eco_506 GSM99086 146 0.0261051200000
eco_507 GSM99088 160 0.0163243100000
eco_510 GSM99102 146 0.0379573200000
eco_512 GSM99131 160 0.0039467260000
eco_512 GSM99131 146 0.0051092390000
eco_519 GSM99194 146 0.0299645400000
eco_521 GSM99199 146 0.0403985700000
eco_524 GSM99394 146 0.0222846700000
eco_527 wt 146 0.0003456821000
eco_528 wt__G 160 0.0049021920000
eco_532 1915 146 0.0134706200000
eco_533 1916 160 0.0060916540000
eco_533 1916 146 0.0282190900000
eco_534 Clean_DIAUX10 146 0.0425788100000
eco_535 Clean_DIAUX5 160 0.0308050500000
eco_536 Clean_H2O25 146 0.0129771000000
eco_539 crpcysB__G 146 0.0185005200000
eco_539 crpcysB__G 160 0.0442896800000
eco_540 crpfruR__G 146 0.0096639300000
eco_542 EC_GLU_WILD_B 160 0.0239697900000
eco_544 EC_GLY_GLY2_44_A 160 0.0227941000000
eco_545 EC_GLY_GLYD_44_A 160 0.0485446600000
eco_546 EC_GLY_GLYD_44_B 160 0.0239437000000
eco_55 EC_LAC_LE_60_A 146 0.0059242630000
eco_558 E-MEXP-267-raw-data-495080223.txt 146 0.0115306500000
eco_56 EC_LAC_LE_60_C 146 0.0024376500000
eco_564 GSM101780 146 0.0174380900000
eco_567 GSM111423 160 0.0411818600000
eco_57 EC_LAC_WILD_E 146 0.0283122300000
eco_572 GSM1368 146 0.0394616900000
eco_573 GSM137282 160 0.0290309200000
eco_573 GSM137282 146 0.0119219900000
eco_576 GSM18261 160 0.0052392720000
eco_578 GSM18288 160 0.0032942610000
eco_58 EC_LAC_WILD_F 146 0.0071558820000
eco_580 GSM37887 146 0.0307618100000
eco_582 GSM63891 160 0.0075811920000
eco_584 GSM73121 146 0.0078473990000
eco_588 GSM77349 146 0.0175135600000
eco_589 GSM77359 146 0.0054873400000
eco_593 GSM83061 160 0.0436178700000
eco_600 GSM98719 146 0.0112784100000
eco_603 GSM99087 146 0.0039506400000
eco_604 GSM99123 146 0.0204714400000
eco_605 GSM99130 146 0.0003399249000
eco_606 GSM99137 146 0.0248906800000
eco_608 GSM99151 160 0.0276394100000
eco_614 GSM99210 146 0.0053339920000
eco_616 1278 146 0.0014463170000
eco_620 Clean_DIAUX14 146 0.0116951800000
eco_621 Clean_DIAUX15 160 0.0419405300000
eco_622 Clean_DIAUX16 146 0.0179816500000
eco_623 Clean_H2O21 146 0.0442199900000
eco_624 Clean_TGC1 160 0.0219982100000
eco_627 EC_GLY_GLY2_44_B 146 0.0246338800000
eco_633 EC_GLY_WILD_E 146 0.0102370000000
eco_635 EC_LAC_L3_20_B 160 0.0111715700000
eco_641 E-MEXP-244-raw-data-396455050.txt 160 0.0452966400000
eco_642 E-MEXP-267-raw-data-495080335.txt 146 0.0305729600000
eco_651 GSM18236 146 0.0375377400000
eco_653 GSM18274 146 0.0112826400000
eco_654 GSM18276 160 0.0269068400000
eco_656 GSM18289 160 0.0183763200000
eco_659 GSM37066 146 0.0433038100000
eco_662 GSM63890 146 0.0170255000000
eco_663 GSM65598 160 0.0098516880000
eco_669 GSM67665 160 0.0277258300000
eco_673 GSM73256 146 0.0007394817000
eco_68 E-MEXP-267-raw-data-495080255.txt 160 0.0234819300000
eco_680 GSM8114 160 0.0358136400000
eco_681 GSM82546 146 0.0066994270000
eco_683 GSM83063 146 0.0401569400000
eco_685 GSM83068 146 0.0026760300000
eco_690 GSM99082 146 0.0476794700000
eco_692 GSM99097 160 0.0209503700000
eco_695 GSM99115 146 0.0383935700000
eco_697 GSM99144 160 0.0185130800000
eco_7 5268 160 0.0250791200000
eco_700 GSM99179 146 0.0269526200000
eco_701 GSM99190 146 0.0022220110000
eco_706 1912 146 0.0404477800000
eco_708 Clean_ANA9 146 0.0319447200000
eco_713 EC_LAC_LD_20_C 160 0.0205535600000
eco_714 EC_LAC_WILD_B 160 0.0465551200000
eco_716 GADXW_exp2 146 0.0195008400000
eco_717 GADXW_exp4 160 0.0210141600000
eco_719 GSM120196 160 0.0453692100000
eco_723 GSM30822 160 0.0008899399000
eco_724 GSM35419 146 0.0327120900000
eco_727 GSM65589 146 0.0088714240000
eco_731 GSM67660 146 0.0119082900000
eco_734 GSM73252 146 0.0455532800000
eco_736 GSM77346 160 0.0006165966000
eco_738 GSM82544 160 0.0064153340000
eco_739 GSM83079 160 0.0013549940000
eco_740 GSM89485 146 0.0203768500000
eco_743 GSM98722 146 0.0379763400000
eco_745 GSM99095 146 0.0135261100000
eco_746 GSM99110 146 0.0274414200000
eco_747 GSM99120 146 0.0092228500000
eco_747 GSM99120 160 0.0264512500000
eco_748 GSM99163 160 0.0202977900000
eco_749 GSM99165 160 0.0121049300000
eco_750 GSM99178 160 0.0228112600000
eco_753 5281 160 0.0142364900000
eco_760 EC_LAC_LD_60_B 160 0.0274563000000
eco_762 GADXW_exp10 160 0.0192271700000
eco_767 GSM18254 146 0.0266930500000
eco_769 GSM18282 160 0.0497990700000
eco_771 GSM73127 146 0.0214033200000
eco_773 GSM73153 146 0.0075524220000
eco_779 GSM99127 146 0.0062708970000
eco_782 GSM99209 160 0.0095533360000
eco_783 Clean_DIAUX8 160 0.0475060500000
eco_783 Clean_DIAUX8 146 0.0180257700000
eco_784 crp__G 146 0.0234483000000
eco_787 fruR__G 146 0.0091418960000
eco_788 GSM101238 160 0.0178267300000
eco_79 GSM101771 160 0.0498667800000
eco_79 GSM101771 146 0.0054049110000
eco_795 GSM18246 146 0.0278186800000
eco_797 GSM73150 160 0.0111269800000
eco_798 GSM73253 146 0.0095322590000
eco_799 GSM73259 146 0.0404627300000
eco_80 GSM101772 160 0.0464985900000
eco_80 GSM101772 146 0.0059776170000
eco_800 GSM73284 160 0.0291340600000
eco_801 GSM82547 146 0.0240587700000
eco_802 GSM82620 160 0.0024111600000
eco_803 GSM98724 146 0.0407065700000
eco_808 GSM99638 160 0.0319036200000
eco_81 GSM101773 160 0.0115349400000
eco_81 GSM101773 146 0.0144312300000
eco_815 GSM101770 146 0.0298819400000
eco_816 GSM106755 146 0.0477379800000
eco_817 GSM18277 146 0.0385030000000
eco_818 GSM73129 146 0.0419978700000
eco_819 GSM77352 146 0.0011222780000
eco_822 GSM99154 146 0.0377310800000
eco_826 GSM106756 146 0.0404037700000
eco_826 GSM106756 160 0.0355381100000
eco_83 GSM106341 146 0.0434394300000
eco_831 GSM99139 146 0.0391087000000
eco_833 GSM99177 160 0.0081669120000
eco_84 GSM106757 146 0.0009453914000
eco_84 GSM106757 160 0.0006265342000
eco_841 GSM37076 146 0.0059881430000
eco_846 GSM18248 146 0.0295008500000
eco_847 GSM73135 146 0.0465179700000
eco_851 GSM99112 146 0.0112487900000
eco_853 GSM73128 146 0.0259344100000
eco_854 GSM99140 160 0.0479894800000
eco_855 GSM99161 160 0.0037487350000
eco_857 EC_LAC_LC_60_C 160 0.0014670330000
eco_857 EC_LAC_LC_60_C 146 0.0094111860000
eco_859 GSM18280 146 0.0294749100000
eco_861 GSM99124 146 0.0311081600000
eco_861 GSM99124 160 0.0288372500000
eco_863 GSM73118 146 0.0244012300000
eco_864 GSM99158 160 0.0161222700000
eco_865 Clean_DIAUX6 160 0.0446737600000
eco_867 GSM83075 160 0.0256074700000
eco_868 GSM73286 146 0.0044699360000
eco_9 5287 146 0.0399856500000
eco_92 GSM114368 146 0.0327652000000
eco_95 GSM116024 160 0.0107295700000
eco_99 GSM118607 146 0.0188089300000