Regulator NrdR

GREs

GRE ID PSSM Score
eco_57 0.0000102614255524

Corems

Corem ID GRE pval
ec512648 eco_57 0.0000000000000
ec622061 eco_57 0.0000000211814
ec622064 eco_57 0.0000000396013
ec622077 eco_57 0.0000000999096
ec622125 eco_57 0.0000000231309

Genes

Gene name Common name Description Start Stop Strand Chromosome GRE pval
b0585 fes enterobactin/ferric enterobactin esterase 612038 613162 + NC_000913.2 eco_57 0.0000069595340
b0588 fepC iron-enterobactin transporter subun 619422 618607 - NC_000913.2 eco_57 0.0000000000000
b0589 fepG iron-enterobactin transporter subun 620411 619419 - NC_000913.2 eco_57 0.0000016925160
b0590 fepD iron-enterobactin transporter subun 621412 620408 - NC_000913.2 eco_57 0.0000000000000
b0591 ybdA predicted transporter 621523 622773 + NC_000913.2 eco_57 0.0000000000000
b0592 fepB iron-enterobactin transporter subun 623733 622777 - NC_000913.2 eco_57 0.0000145055400
b1102 fhuE ferric-rhodotorulic acid outer membrane transporter 1160774 1158585 - NC_000913.2 eco_57 0.0025439270000
b1452 yncE hypothetical protein 1521331 1522392 + NC_000913.2 eco_57 0.0000843795700
b1494 pqqL predicted peptidase 1573226 1570431 - NC_000913.2 eco_57 0.0000000376918
b2155 cirA ferric iron-catecholate outer membrane transporter 2244791 2242800 - NC_000913.2 eco_57 0.0000000000000
b2674 nrdI hypothetical protein 2798987 2799397 + NC_000913.2 eco_57 0.0000082812090
b2676 nrdF ribonucleotide-diphosphate reductase beta subun 2801524 2802483 + NC_000913.2 eco_57 0.0000034797870
b3005 exbD membrane spanning protein in TonB-ExbB-ExbD complex 3149265 3148840 - NC_000913.2 eco_57 0.0057593650000
b3006 exbB membrane spanning protein in TonB-ExbB-ExbD complex 3150006 3149272 - NC_000913.2 eco_57 0.0000756474900
b3070 yqjH predicted siderophore interacting protein 3214513 3213749 - NC_000913.2 eco_57 0.0000000000000
b3337 bfd bacterioferritin-associated ferredoxin 3465013 3464819 - NC_000913.2 eco_57 0.0003174117000
b3908 sodA superoxide dismutase, manganese 4098833 4099453 + NC_000913.2 eco_57 0.0010346940000
b4287 fecE KpLE2 phage-like element; iron-dicitrate transporter subun 4509480 4508713 - NC_000913.2 eco_57 0.0000182687800
b4291 fecA KpLE2 phage-like element; ferric citrate outer membrane transporter 4514700 4512376 - NC_000913.2 eco_57 0.0007546286000
b4367 fhuF ferric iron reductase involved in ferric hydroximate transpor 4603686 4602898 - NC_000913.2 eco_57 0.0000006218928

Conditions

Condition ID Condition Name GRE pval
eco_1 1282 52 0.0005543809000
eco_10 8455 52 0.0022767280000
eco_100 GSM118612 52 0.0066944440000
eco_101 GSM118615 52 0.0057331550000
eco_103 GSM120166 52 0.0000522520700
eco_104 GSM120192 52 0.0055153490000
eco_105 GSM120193 52 0.0015377570000
eco_106 GSM1371 52 0.0000859624800
eco_109 GSM1379 52 0.0211910900000
eco_111 GSM18235 52 0.0011735850000
eco_112 GSM18247 52 0.0065919810000
eco_113 GSM18251 52 0.0004700582000
eco_114 GSM18252 52 0.0008935086000
eco_115 GSM18255 52 0.0000122550000
eco_116 GSM18256 52 0.0000001421994
eco_117 GSM18257 52 0.0045172760000
eco_118 GSM18260 52 0.0001645626000
eco_119 GSM18262 52 0.0001228918000
eco_120 GSM18263 52 0.0013847420000
eco_121 GSM18264 52 0.0045427340000
eco_123 GSM18279 52 0.0288786700000
eco_124 GSM18285 52 0.0237012700000
eco_125 GSM30815 52 0.0044183110000
eco_135 GSM37886 52 0.0107532900000
eco_137 GSM62194 52 0.0002413767000
eco_138 GSM62195 52 0.0032594800000
eco_139 GSM62199 52 0.0369899800000
eco_141 GSM63889 52 0.0017528080000
eco_144 GSM65590 52 0.0000170224600
eco_145 GSM65626 52 0.0261275600000
eco_149 GSM67647 52 0.0000005088430
eco_150 GSM67656 52 0.0012296250000
eco_151 GSM73124 52 0.0002755493000
eco_153 GSM73130 52 0.0210718400000
eco_155 GSM73139 52 0.0030526130000
eco_156 GSM73140 52 0.0095361270000
eco_157 GSM73141 52 0.0026153970000
eco_159 GSM73145 52 0.0005513811000
eco_160 GSM73146 52 0.0009808712000
eco_161 GSM73151 52 0.0048445770000
eco_162 GSM73152 52 0.0000121798900
eco_163 GSM73155 52 0.0048100880000
eco_165 GSM73158 52 0.0005855314000
eco_166 GSM73159 52 0.0031149670000
eco_167 GSM73160 52 0.0070701700000
eco_170 GSM73263 52 0.0393198500000
eco_171 GSM73264 52 0.0066015540000
eco_172 GSM73265 52 0.0008526767000
eco_175 GSM73272 52 0.0205255300000
eco_177 GSM73277 52 0.0034387440000
eco_178 GSM73283 52 0.0198394600000
eco_179 GSM73285 52 0.0028093820000
eco_18 Clean_DIAUX3 52 0.0498274100000
eco_184 GSM77353 52 0.0287718200000
eco_189 GSM8119 52 0.0000154044800
eco_191 GSM82542 52 0.0000114923600
eco_192 GSM82545 52 0.0013447280000
eco_196 GSM82613 52 0.0009493668000
eco_197 GSM82616 52 0.0006277188000
eco_20 Clean_H2O210 52 0.0017236450000
eco_204 GSM83071 52 0.0044583650000
eco_205 GSM83077 52 0.0168665400000
eco_207 GSM83080 52 0.0097975200000
eco_208 GSM88914 52 0.0466323300000
eco_209 GSM88916 52 0.0017439440000
eco_210 GSM98717 52 0.0000151883200
eco_211 GSM98721 52 0.0002100669000
eco_213 GSM98726 52 0.0394231400000
eco_214 GSM98727 52 0.0000162033800
eco_216 GSM99090 52 0.0476490700000
eco_217 GSM99091 52 0.0414211300000
eco_220 GSM99107 52 0.0036031370000
eco_221 GSM99108 52 0.0000051585760
eco_226 GSM99121 52 0.0253353300000
eco_229 GSM99129 52 0.0270563000000
eco_23 Clean_H2O24 52 0.0076869530000
eco_231 GSM99133 52 0.0059796319000
eco_232 GSM99136 52 0.0109667800000
eco_234 GSM99152 52 0.0020914600000
eco_24 Clean_H2O27 52 0.0026497960000
eco_240 GSM99181 52 0.0002599833000
eco_246 GSM99197 52 0.0009040825000
eco_247 GSM99203 52 0.0133986700000
eco_251 GSM99384 52 0.0200531300000
eco_252 GSM99392 52 0.0000000300555
eco_253 GSM99393 52 0.0000407689400
eco_254 GSM99395 52 0.0206811300000
eco_256 GSM99401 52 0.0398737000000
eco_258 1277 52 0.0026158590000
eco_260 1592 52 0.0188765300000
eco_263 1639 52 0.0094784640000
eco_265 1911 52 0.0029866790000
eco_266 5265 52 0.0001183799000
eco_273 Clean_H2O23 52 0.0092689420000
eco_274 Clean_H2O26 52 0.0218148100000
eco_276 cysB__G 52 0.0000001254745
eco_278 EC_GLU_WILD_C 52 0.0036196170000
eco_280 EC_GLY_GLYA_20_B 52 0.0173137200000
eco_281 EC_GLY_GLYD_20_A 52 0.0000710356800
eco_284 EC_LAC_LA_20_B 52 0.0031731030000
eco_285 EC_LAC_LA_20_C 52 0.0075143190000
eco_289 EC_LAC_LE_20_B 52 0.0062631080000
eco_290 EC_LAC_WILD_D 52 0.0047047380000
eco_294 E-MEXP-245-raw-data-396455413.txt 52 0.0010287400000
eco_298 fur 52 0.0003173549000
eco_302 GSM101231 52 0.0255366300000
eco_303 GSM101235 52 0.0000421842400
eco_304 GSM101237 52 0.0017684020000
eco_305 GSM101241 52 0.0211336400000
eco_307 GSM101775 52 0.0372876500000
eco_309 GSM101779 52 0.0383117900000
eco_317 GSM114370 52 0.0345682500000
eco_32 EC_GLY_GLY1_44_A 52 0.0074662020000
eco_321 GSM118611 52 0.0031160790000
eco_327 GSM1367 52 0.0067459770000
eco_334 GSM18266 52 0.0496680600000
eco_335 GSM18271 52 0.0000820209200
eco_336 GSM18275 52 0.0027121120000
eco_337 GSM18281 52 0.0000000214374
eco_338 GSM18283 52 0.0000115721600
eco_339 GSM23465 52 0.0020216050000
eco_342 GSM37888 52 0.0064201570000
eco_344 GSM62196 52 0.0063363260000
eco_346 GSM65593 52 0.0270684500000
eco_349 GSM67648 52 0.0001423591000
eco_350 GSM73120 52 0.0093903000000
eco_352 GSM73134 52 0.0007375005000
eco_353 GSM73137 52 0.0134223100000
eco_355 GSM73255 52 0.0141753300000
eco_357 GSM73262 52 0.0131263900000
eco_358 GSM73266 52 0.0000528989700
eco_361 GSM73281 52 0.0000070607520
eco_364 GSM77360 52 0.0014767390000
eco_365 GSM8113 52 0.0073875870000
eco_37 EC_GLY_GLYA_44_B 52 0.0001768828000
eco_370 GSM82550 52 0.0242034600000
eco_371 GSM82552 52 0.0148696600000
eco_377 GSM83057 52 0.0036455860000
eco_378 GSM83066 52 0.0129636700000
eco_38 EC_GLY_GLYA_44_C 52 0.0073023090000
eco_383 GSM88912 52 0.0330384100000
eco_386 GSM98731 52 0.0033480560000
eco_39 EC_GLY_GLYB_44_A 52 0.0424563600000
eco_390 GSM99101 52 0.0008584226000
eco_394 GSM99125 52 0.0020855260000
eco_398 GSM99148 52 0.0226261900000
eco_4 1597 52 0.0000482420200
eco_407 GSM99193 52 0.0366176600000
eco_408 GSM99195 52 0.0198799500000
eco_411 GSM99208 52 0.0197066300000
eco_412 GSM99390 52 0.0000034527840
eco_419 1637 52 0.0000526679800
eco_420 1908 52 0.0188153700000
eco_421 5266 52 0.0042803760000
eco_429 crpcysB 52 0.0466513100000
eco_43 EC_GLY_WILD_D 52 0.0000554335500
eco_432 EC_GLY_GLYC_44_C 52 0.0001704080000
eco_433 EC_LAC_L3_20_C 52 0.0050265530000
eco_435 EC_LAC_LC_20_C 52 0.0435251400000
eco_437 E-MEXP-267-raw-data-495080271.txt 52 0.0166900000000
eco_44 EC_LAC_L2_20_C 52 0.0019534280000
eco_451 GSM114371 52 0.0361726000000
eco_454 GSM118600 52 0.0055793940000
eco_455 GSM118617 52 0.0350787400000
eco_46 EC_LAC_L2_60_C 52 0.0336111900000
eco_460 GSM18259 52 0.0004523493000
eco_461 GSM18284 52 0.0041173430000
eco_462 GSM23459 52 0.0303171300000
eco_465 GSM37068 52 0.0027237020000
eco_47 EC_LAC_L3_60_A 52 0.0052375270000
eco_470 GSM38548 52 0.0112135400000
eco_473 GSM65588 52 0.0061503060000
eco_48 EC_LAC_LA_60_A 52 0.0118796900000
eco_480 GSM67659 52 0.0000028468310
eco_481 GSM73119 52 0.0418055100000
eco_482 GSM73123 52 0.0028018760000
eco_485 GSM73156 52 0.0295031200000
eco_486 GSM73261 52 0.0023255610000
eco_487 GSM73268 52 0.0067674570000
eco_488 GSM73279 52 0.0014381320000
eco_49 EC_LAC_LA_60_D 52 0.0121474400000
eco_498 GSM82610 52 0.0195561400000
eco_5 1913 52 0.0142507900000
eco_500 GSM88913 52 0.0312404900000
eco_503 GSM98725 52 0.0004512367000
eco_506 GSM99086 52 0.0258619800000
eco_507 GSM99088 52 0.0350273000000
eco_511 GSM99104 52 0.0356392500000
eco_512 GSM99131 52 0.0000000883144
eco_513 GSM99134 52 0.0257720700000
eco_523 GSM99389 52 0.0008866775000
eco_527 wt 52 0.0438368200000
eco_53 EC_LAC_LC_60_A 52 0.0065366870000
eco_533 1916 52 0.0044008580000
eco_534 Clean_DIAUX10 52 0.0096841600000
eco_535 Clean_DIAUX5 52 0.0375983700000
eco_536 Clean_H2O25 52 0.0071199970000
eco_54 EC_LAC_LE_20_C 52 0.0003601147000
eco_540 crpfruR__G 52 0.0018848700000
eco_545 EC_GLY_GLYD_44_A 52 0.0001001162000
eco_546 EC_GLY_GLYD_44_B 52 0.0251590100000
eco_549 EC_LAC_L2_20_B 52 0.0051778640000
eco_550 EC_LAC_L2_60_A 52 0.0245665500000
eco_551 EC_LAC_LA_60_C 52 0.0006852631000
eco_556 EC_LAC_LD_60_C 52 0.0153097000000
eco_563 GSM101778 52 0.0389767600000
eco_564 GSM101780 52 0.0131244800000
eco_565 GSM106751 52 0.0005244186000
eco_576 GSM18261 52 0.0073533460000
eco_577 GSM18287 52 0.0036355170000
eco_58 EC_LAC_WILD_F 52 0.0030871230000
eco_581 GSM62197 52 0.0001485358000
eco_582 GSM63891 52 0.0049598270000
eco_584 GSM73121 52 0.0034124330000
eco_59 E-MEXP-222-raw-data-386284924.txt 52 0.0349075900000
eco_590 GSM77361 52 0.0483112300000
eco_592 GSM83056 52 0.0404364500000
eco_594 GSM83064 52 0.0006253424000
eco_596 GSM83076 52 0.0136840900000
eco_6 1914 52 0.0281523900000
eco_600 GSM98719 52 0.0284270900000
eco_601 GSM98730 52 0.0010112370000
eco_602 GSM99081 52 0.0236180500000
eco_603 GSM99087 52 0.0098968500000
eco_604 GSM99123 52 0.0060616770000
eco_605 GSM99130 52 0.0011916050000
eco_61 E-MEXP-222-raw-data-386285038.txt 52 0.0004313419000
eco_615 GSM99399 52 0.0136463000000
eco_617 1641 52 0.0460677000000
eco_618 1642 52 0.0085022310000
eco_634 EC_LAC_L2_20_A 52 0.0066407830000
eco_637 EC_LAC_L3_60_C 52 0.0285191700000
eco_640 EC_LAC_LE_60_B 52 0.0143811600000
eco_641 E-MEXP-244-raw-data-396455050.txt 52 0.0123303600000
eco_643 GSM101766 52 0.0128098200000
eco_649 GSM118610 52 0.0067168280000
eco_651 GSM18236 52 0.0376805200000
eco_653 GSM18274 52 0.0149222100000
eco_654 GSM18276 52 0.0118911100000
eco_656 GSM18289 52 0.0073669510000
eco_658 GSM30823 52 0.0045571580000
eco_663 GSM65598 52 0.0002357124000
eco_665 GSM65622 52 0.0042477300000
eco_667 GSM67657 52 0.0108818600000
eco_669 GSM67665 52 0.0016303560000
eco_670 GSM73126 52 0.0126507800000
eco_672 GSM73148 52 0.0330644200000
eco_673 GSM73256 52 0.0002804271000
eco_675 GSM73274 52 0.0001034976000
eco_676 GSM73275 52 0.0000009915073
eco_677 GSM73280 52 0.0001439584000
eco_69 fur__G 52 0.0122232900000
eco_691 GSM99094 52 0.0450410200000
eco_693 GSM99100 52 0.0015898350000
eco_698 GSM99155 52 0.0382917800000
eco_699 GSM99171 52 0.0002795103000
eco_702 GSM99202 52 0.0471165600000
eco_705 GSM99397 52 0.0031233500000
eco_710 crpfruR 52 0.0459091500000
eco_712 EC_LAC_LA_20_A 52 0.0329962600000
eco_714 EC_LAC_WILD_B 52 0.0000734091100
eco_719 GSM120196 52 0.0109672800000
eco_72 GSM101230 52 0.0246962800000
eco_721 GSM18265 52 0.0173561400000
eco_722 GSM30816 52 0.0042154380000
eco_723 GSM30822 52 0.0008899399000
eco_727 GSM65589 52 0.0295258000000
eco_73 GSM101232 52 0.0000086022780
eco_730 GSM67655 52 0.0057942480000
eco_731 GSM67660 52 0.0026190610000
eco_732 GSM73133 52 0.0019368370000
eco_733 GSM73142 52 0.0020075570000
eco_734 GSM73252 52 0.0074823480000
eco_735 GSM73278 52 0.0010877070000
eco_736 GSM77346 52 0.0058777460000
eco_739 GSM83079 52 0.0013549940000
eco_74 GSM101233 52 0.0005905910000
eco_742 GSM94004 52 0.0371518000000
eco_743 GSM98722 52 0.0006179157000
eco_75 GSM101234 52 0.0004075827000
eco_756 EC_GLY_GLYB_44_C 52 0.0447551900000
eco_757 EC_GLY_GLYC_44_B 52 0.0404781900000
eco_759 EC_GLY_WILD_C 52 0.0085272460000
eco_761 EC_LAC_WILD_A 52 0.0359803000000
eco_764 GSM101243 52 0.0119873600000
eco_765 GSM114612 52 0.0003890866000
eco_767 GSM18254 52 0.0217669900000
eco_768 GSM18278 52 0.0184599000000
eco_769 GSM18282 52 0.0158916300000
eco_77 GSM101240 52 0.0131519100000
eco_771 GSM73127 52 0.0005925329000
eco_776 GSM77342 52 0.0487852400000
eco_779 GSM99127 52 0.0422886200000
eco_78 GSM101244 52 0.0328960500000
eco_783 Clean_DIAUX8 52 0.0315885700000
eco_784 crp__G 52 0.0442908600000
eco_788 GSM101238 52 0.0178267300000
eco_792 GSM114613 52 0.0093837210000
eco_793 GSM116029 52 0.0056169020000
eco_797 GSM73150 52 0.0046600590000
eco_798 GSM73253 52 0.0052456030000
eco_799 GSM73259 52 0.0025660940000
eco_8 5277 52 0.0013265660000
eco_80 GSM101772 52 0.0059776170000
eco_803 GSM98724 52 0.0000649232800
eco_810 5272 52 0.0029585850000
eco_813 EC_GLY_GLYB_20_C 52 0.0486172000000
eco_817 GSM18277 52 0.0056824550000
eco_818 GSM73129 52 0.0006001142000
eco_823 EC_GLY_GLYB_44_B 52 0.0016672510000
eco_826 GSM106756 52 0.0433271400000
eco_829 GSM67663 52 0.0063239100000
eco_830 GSM99106 52 0.0188237400000
eco_833 GSM99177 52 0.0051230180000
eco_847 GSM73135 52 0.0498181500000
eco_849 GSM120197 52 0.0000005407313
eco_852 GSM99156 52 0.0003134957000
eco_857 EC_LAC_LC_60_C 52 0.0276308200000
eco_861 GSM99124 52 0.0056118290000
eco_863 GSM73118 52 0.0004130960000
eco_867 GSM83075 52 0.0048753550000
eco_89 GSM111420 52 0.0128038400000
eco_9 5287 52 0.0201849700000
eco_93 GSM114386 52 0.0003623004000
eco_94 GSM114614 52 0.0000476856800
eco_95 GSM116024 52 0.0091647150000