Regulator NsrR
GREs
| GRE ID | PSSM | Score |
|---|---|---|
| eco_191 |  |
0.0054302911986899 |
| eco_390 |  |
0.0313144662038915 |
Corems
| Corem ID | GRE | pval |
|---|---|---|
| ec534467 | eco_390 | 0.0000000000000 |
Genes
| Gene name | Common name | Description | Start | Stop | Strand | Chromosome | GRE | pval |
|---|---|---|---|---|---|---|---|---|
| b4392 | slt | soluble lytic murein transglycosylase | 4628756 | 4630693 | + | NC_000913.2 | eco_191 | 0.0000026031290 |
| b0303 | ykgI | orf, hypothetical protein | 317791 | 317555 | - | NC_000913.2 | eco_191 | 0.0000000000016 |
| b0380 | b0380 | orf, hypothetical protein | 398817 | 399029 | + | NC_000913.2 | eco_191 | 0.0000096125600 |
| b0518 | fdrA | membrane protein FdrA | 545904 | 547571 | + | NC_000913.2 | eco_191 | 0.0000024975850 |
| b0699 | ybfA | hypothetical protein | 728357 | 728563 | + | NC_000913.2 | eco_191 | 0.0000012690460 |
| b1020 | phoH | conserved protein with nucleoside triphosphate hydrolase domain | 1084215 | 1085279 | + | NC_000913.2 | eco_191 | 0.0000234062000 |
| b2245 | yfaU | predicted 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase | 2356867 | 2356064 | - | NC_000913.2 | eco_191 | 0.0000044862620 |
| b2364 | dsdC | DNA-binding transcriptional dual regulator | 2475651 | 2474716 | - | NC_000913.2 | eco_191 | 0.0000000000000 |
| b2365 | dsdX | predicted transporter | 2475869 | 2477206 | + | NC_000913.2 | eco_191 | 0.0000000000000 |
| b2366 | dsdA | D-serine dehydratase | 2477224 | 2478552 | + | NC_000913.2 | eco_191 | 0.0000000000000 |
| b4063 | soxR | DNA-binding transcriptional dual regulator, Fe-S center for redox-sensing | 4275492 | 4275956 | + | NC_000913.2 | eco_191 | 0.0000277123600 |
| b0034 | caiF | transcriptional regulator of cai operon | 34300 | 34695 | + | NC_000913.2 | eco_390 | 0.0000004903412 |
| b4380 | yjjI | hypothetical protein | 4615088 | 4613538 | - | NC_000913.2 | eco_390 | 0.0000000017922 |
| b2726 | hypA | protein involved in nickel insertion into hydrogenases 3 | 2848669 | 2849019 | + | NC_000913.2 | eco_390 | 0.0000006727804 |
| b2730 | hypE | carbamoyl phosphate phosphatase, hydrogenase 3 maturation protein | 2851276 | 2852286 | + | NC_000913.2 | eco_390 | 0.0000000224997 |
| b3156 | yhbS | predicted acyltransferase with acyl-CoA N-acyltransferase domain | 3298780 | 3298277 | - | NC_000913.2 | eco_390 | 0.0000000000001 |
| b0872 | hcr | HCP oxidoreductase, NADH-dependen | 911373 | 910405 | - | NC_000913.2 | eco_390 | 0.0000078993110 |
| b3157 | yhbT | predicted lipid carrier protein | 3299298 | 3298774 | - | NC_000913.2 | eco_390 | 0.0000000006629 |
| b1593 | b1593 | orf, hypothetical protein | 1665243 | 1664548 | - | NC_000913.2 | eco_390 | 0.0000034289990 |
| b1854 | pykA | pyruvate kinase | 1935673 | 1937115 | + | NC_000913.2 | eco_390 | 0.0000003980883 |
| b3158 | yhbU | predicted peptidase (collagenase-like) | 3299507 | 3300502 | + | NC_000913.2 | eco_390 | 0.0000000000023 |
| b3159 | yhbV | orf, hypothetical protein | 3300511 | 3301389 | + | NC_000913.2 | eco_390 | 0.0000000072626 |
Conditions
| Condition ID | Condition Name | GRE | pval |
|---|---|---|---|
| eco_101 | GSM118615 | 330 | 0.0056543640000 |
| eco_102 | GSM118620 | 330 | 0.0378258800000 |
| eco_106 | GSM1371 | 330 | 0.0012996630000 |
| eco_109 | GSM1379 | 330 | 0.0300306900000 |
| eco_113 | GSM18251 | 330 | 0.0344942700000 |
| eco_116 | GSM18256 | 330 | 0.0094056960000 |
| eco_119 | GSM18262 | 330 | 0.0274430900000 |
| eco_120 | GSM18263 | 330 | 0.0001359325000 |
| eco_121 | GSM18264 | 330 | 0.0236780800000 |
| eco_122 | GSM18273 | 330 | 0.0275309600000 |
| eco_123 | GSM18279 | 330 | 0.0072790570000 |
| eco_124 | GSM18285 | 330 | 0.0308616100000 |
| eco_127 | GSM30820 | 330 | 0.0302011500000 |
| eco_14 | Clean_ANA7 | 330 | 0.0226623600000 |
| eco_140 | GSM63887 | 166 | 0.0380599000000 |
| eco_141 | GSM63889 | 330 | 0.0275560400000 |
| eco_141 | GSM63889 | 166 | 0.0300674000000 |
| eco_142 | GSM63892 | 166 | 0.0398174200000 |
| eco_143 | GSM63893 | 330 | 0.0220998500000 |
| eco_145 | GSM65626 | 166 | 0.0396250800000 |
| eco_145 | GSM65626 | 330 | 0.0012694210000 |
| eco_146 | GSM65629 | 166 | 0.0428729500000 |
| eco_147 | GSM65630 | 330 | 0.0054064890000 |
| eco_148 | GSM65641 | 330 | 0.0235538000000 |
| eco_150 | GSM67656 | 330 | 0.0257173600000 |
| eco_152 | GSM73125 | 166 | 0.0116584200000 |
| eco_161 | GSM73151 | 166 | 0.0131537800000 |
| eco_161 | GSM73151 | 330 | 0.0001253272000 |
| eco_162 | GSM73152 | 330 | 0.0076900850000 |
| eco_162 | GSM73152 | 166 | 0.0417011200000 |
| eco_163 | GSM73155 | 166 | 0.0445143700000 |
| eco_165 | GSM73158 | 330 | 0.0062979100000 |
| eco_167 | GSM73160 | 166 | 0.0354715000000 |
| eco_17 | Clean_DIAUX13 | 330 | 0.0322576700000 |
| eco_170 | GSM73263 | 330 | 0.0264375300000 |
| eco_176 | GSM73276 | 330 | 0.0390760000000 |
| eco_179 | GSM73285 | 330 | 0.0039474560000 |
| eco_183 | GSM77351 | 330 | 0.0413278000000 |
| eco_187 | GSM7886 | 166 | 0.0021378960000 |
| eco_188 | GSM8116 | 330 | 0.0293081500000 |
| eco_189 | GSM8119 | 166 | 0.0149026300000 |
| eco_190 | GSM8120 | 166 | 0.0077565880000 |
| eco_191 | GSM82542 | 330 | 0.0021857070000 |
| eco_192 | GSM82545 | 166 | 0.0062892610000 |
| eco_192 | GSM82545 | 330 | 0.0254161700000 |
| eco_193 | GSM82548 | 330 | 0.0355029300000 |
| eco_195 | GSM82603 | 330 | 0.0317099700000 |
| eco_196 | GSM82613 | 330 | 0.0000925870200 |
| eco_197 | GSM82616 | 330 | 0.0492696400000 |
| eco_198 | GSM83055 | 330 | 0.0007270640000 |
| eco_2 | 1285 | 166 | 0.0171027200000 |
| eco_201 | GSM83062 | 330 | 0.0067109710000 |
| eco_202 | GSM83065 | 330 | 0.0031391220000 |
| eco_206 | GSM83078 | 330 | 0.0341678200000 |
| eco_206 | GSM83078 | 166 | 0.0140355200000 |
| eco_210 | GSM98717 | 166 | 0.0255849700000 |
| eco_211 | GSM98721 | 330 | 0.0265390900000 |
| eco_214 | GSM98727 | 330 | 0.0002941762000 |
| eco_216 | GSM99090 | 330 | 0.0097185360000 |
| eco_218 | GSM99096 | 166 | 0.0258271600000 |
| eco_224 | GSM99117 | 166 | 0.0080631630000 |
| eco_225 | GSM99119 | 166 | 0.0003531884000 |
| eco_227 | GSM99122 | 330 | 0.0388067600000 |
| eco_229 | GSM99129 | 166 | 0.0474591900000 |
| eco_235 | GSM99159 | 166 | 0.0006565180000 |
| eco_236 | GSM99160 | 166 | 0.0278757500000 |
| eco_239 | GSM99173 | 166 | 0.0022109040000 |
| eco_24 | Clean_H2O27 | 330 | 0.0034621890000 |
| eco_240 | GSM99181 | 166 | 0.0203812600000 |
| eco_246 | GSM99197 | 330 | 0.0385957500000 |
| eco_254 | GSM99395 | 330 | 0.0321077900000 |
| eco_255 | GSM99396 | 330 | 0.0420509200000 |
| eco_26 | Clean_TGC14 | 330 | 0.0055671230000 |
| eco_265 | 1911 | 166 | 0.0173956200000 |
| eco_273 | Clean_H2O23 | 330 | 0.0076199640000 |
| eco_285 | EC_LAC_LA_20_C | 330 | 0.0208733000000 |
| eco_286 | EC_LAC_LB_20_A | 166 | 0.0275132900000 |
| eco_287 | EC_LAC_LB_20_C | 166 | 0.0073011080000 |
| eco_288 | EC_LAC_LD_20_B | 330 | 0.0338873900000 |
| eco_296 | E-MEXP-267-raw-data-495080351.txt | 166 | 0.0316175000000 |
| eco_3 | 1593 | 330 | 0.0043406800000 |
| eco_300 | GADXW_exp8 | 166 | 0.0041210660000 |
| eco_304 | GSM101237 | 166 | 0.0092641240000 |
| eco_318 | GSM114384 | 330 | 0.0154900600000 |
| eco_327 | GSM1367 | 166 | 0.0088437290000 |
| eco_329 | GSM1374 | 330 | 0.0281895100000 |
| eco_332 | GSM18249 | 330 | 0.0401315000000 |
| eco_333 | GSM18258 | 166 | 0.0095040380000 |
| eco_334 | GSM18266 | 330 | 0.0036856030000 |
| eco_337 | GSM18281 | 166 | 0.0486424800000 |
| eco_343 | GSM38549 | 166 | 0.0458431100000 |
| eco_344 | GSM62196 | 166 | 0.0317575700000 |
| eco_348 | GSM65636 | 330 | 0.0241738500000 |
| eco_353 | GSM73137 | 330 | 0.0446730500000 |
| eco_357 | GSM73262 | 330 | 0.0260514800000 |
| eco_359 | GSM73269 | 166 | 0.0438757900000 |
| eco_367 | GSM8117 | 166 | 0.0064974970000 |
| eco_37 | EC_GLY_GLYA_44_B | 330 | 0.0308381900000 |
| eco_375 | GSM82606 | 330 | 0.0111452600000 |
| eco_377 | GSM83057 | 330 | 0.0039918330000 |
| eco_378 | GSM83066 | 166 | 0.0071295510000 |
| eco_38 | EC_GLY_GLYA_44_C | 330 | 0.0318054700000 |
| eco_382 | GSM83083 | 330 | 0.0268493600000 |
| eco_386 | GSM98731 | 330 | 0.0073406430000 |
| eco_389 | GSM99098 | 166 | 0.0218086800000 |
| eco_39 | EC_GLY_GLYB_44_A | 330 | 0.0437763000000 |
| eco_390 | GSM99101 | 330 | 0.0134461800000 |
| eco_391 | GSM99105 | 330 | 0.0307425900000 |
| eco_392 | GSM99114 | 166 | 0.0308505900000 |
| eco_396 | GSM99143 | 166 | 0.0068621430000 |
| eco_4 | 1597 | 330 | 0.0314823700000 |
| eco_402 | GSM99166 | 166 | 0.0033785320000 |
| eco_405 | GSM99187 | 166 | 0.0456255500000 |
| eco_408 | GSM99195 | 330 | 0.0487473700000 |
| eco_41 | EC_GLY_GLYC_20_C | 166 | 0.0402579900000 |
| eco_414 | GSM99398 | 166 | 0.0050074860000 |
| eco_415 | GSM99400 | 166 | 0.0056433520000 |
| eco_416 | 1290 | 166 | 0.0326984100000 |
| eco_418 | 14831 | 330 | 0.0042814910000 |
| eco_43 | EC_GLY_WILD_D | 330 | 0.0082101700000 |
| eco_430 | EC_GLY_GLY1_20_A | 166 | 0.0136855000000 |
| eco_432 | EC_GLY_GLYC_44_C | 330 | 0.0352427000000 |
| eco_433 | EC_LAC_L3_20_C | 166 | 0.0413516700000 |
| eco_439 | GADXW_exp1 | 166 | 0.0357781900000 |
| eco_44 | EC_LAC_L2_20_C | 166 | 0.0154306000000 |
| eco_462 | GSM23459 | 330 | 0.0279314400000 |
| eco_464 | GSM35418 | 330 | 0.0253299300000 |
| eco_47 | EC_LAC_L3_60_A | 330 | 0.0006223535000 |
| eco_470 | GSM38548 | 330 | 0.0380854800000 |
| eco_472 | GSM63896 | 330 | 0.0112924500000 |
| eco_475 | GSM65623 | 166 | 0.0002139548000 |
| eco_476 | GSM65628 | 166 | 0.0317781100000 |
| eco_48 | EC_LAC_LA_60_A | 330 | 0.0044008510000 |
| eco_484 | GSM73154 | 166 | 0.0089700820000 |
| eco_487 | GSM73268 | 166 | 0.0198430900000 |
| eco_49 | EC_LAC_LA_60_D | 166 | 0.0441629500000 |
| eco_492 | GSM77348 | 166 | 0.0075932950000 |
| eco_496 | GSM82600 | 330 | 0.0277111900000 |
| eco_497 | GSM82605 | 330 | 0.0276038000000 |
| eco_505 | GSM99083 | 166 | 0.0350917600000 |
| eco_507 | GSM99088 | 330 | 0.0411609100000 |
| eco_509 | GSM99099 | 166 | 0.0277834700000 |
| eco_509 | GSM99099 | 330 | 0.0245234900000 |
| eco_510 | GSM99102 | 166 | 0.0003483602000 |
| eco_511 | GSM99104 | 330 | 0.0085146090000 |
| eco_512 | GSM99131 | 330 | 0.0400854600000 |
| eco_516 | GSM99169 | 166 | 0.0192771600000 |
| eco_519 | GSM99194 | 330 | 0.0255637100000 |
| eco_519 | GSM99194 | 166 | 0.0265148500000 |
| eco_523 | GSM99389 | 166 | 0.0393849200000 |
| eco_526 | STATIONARYPHASE_CH | 330 | 0.0345162100000 |
| eco_535 | Clean_DIAUX5 | 166 | 0.0308050500000 |
| eco_542 | EC_GLU_WILD_B | 330 | 0.0234721000000 |
| eco_547 | EC_GLY_GLYE_20_B | 330 | 0.0007700319000 |
| eco_550 | EC_LAC_L2_60_A | 166 | 0.0221622100000 |
| eco_551 | EC_LAC_LA_60_C | 330 | 0.0085562810000 |
| eco_551 | EC_LAC_LA_60_C | 166 | 0.0494134700000 |
| eco_554 | EC_LAC_LD_20_A | 166 | 0.0197742700000 |
| eco_555 | EC_LAC_LD_60_A | 330 | 0.0351690600000 |
| eco_557 | E-MEXP-245-raw-data-396455349.txt | 330 | 0.0247645400000 |
| eco_558 | E-MEXP-267-raw-data-495080223.txt | 166 | 0.0322223300000 |
| eco_563 | GSM101778 | 330 | 0.0274536200000 |
| eco_574 | GSM1375 | 166 | 0.0107055200000 |
| eco_577 | GSM18287 | 330 | 0.0372371300000 |
| eco_578 | GSM18288 | 330 | 0.0386940400000 |
| eco_58 | EC_LAC_WILD_F | 330 | 0.0111816400000 |
| eco_580 | GSM37887 | 330 | 0.0240906000000 |
| eco_584 | GSM73121 | 330 | 0.0197562100000 |
| eco_585 | GSM73132 | 166 | 0.0123936200000 |
| eco_586 | GSM73149 | 166 | 0.0157697500000 |
| eco_589 | GSM77359 | 166 | 0.0443039900000 |
| eco_59 | E-MEXP-222-raw-data-386284924.txt | 330 | 0.0427506000000 |
| eco_593 | GSM83061 | 330 | 0.0076394130000 |
| eco_594 | GSM83064 | 330 | 0.0050849730000 |
| eco_595 | GSM83070 | 330 | 0.0362458200000 |
| eco_605 | GSM99130 | 330 | 0.0260907300000 |
| eco_609 | GSM99170 | 166 | 0.0188287900000 |
| eco_61 | E-MEXP-222-raw-data-386285038.txt | 330 | 0.0000034512370 |
| eco_611 | GSM99201 | 166 | 0.0004506166000 |
| eco_613 | GSM99207 | 166 | 0.0064373030000 |
| eco_617 | 1641 | 166 | 0.0323101900000 |
| eco_62 | E-MEXP-222-raw-data-386285101.txt | 330 | 0.0232380800000 |
| eco_621 | Clean_DIAUX15 | 330 | 0.0472517000000 |
| eco_621 | Clean_DIAUX15 | 166 | 0.0128253300000 |
| eco_622 | Clean_DIAUX16 | 330 | 0.0323751600000 |
| eco_623 | Clean_H2O21 | 330 | 0.0311867700000 |
| eco_628 | EC_GLY_GLYB_20_A | 166 | 0.0047574100000 |
| eco_634 | EC_LAC_L2_20_A | 166 | 0.0092503490000 |
| eco_635 | EC_LAC_L3_20_B | 166 | 0.0415673400000 |
| eco_64 | E-MEXP-245-raw-data-396455333.txt | 330 | 0.0058448550000 |
| eco_642 | E-MEXP-267-raw-data-495080335.txt | 166 | 0.0279315600000 |
| eco_649 | GSM118610 | 166 | 0.0182637700000 |
| eco_655 | GSM18286 | 330 | 0.0022712380000 |
| eco_665 | GSM65622 | 166 | 0.0160506700000 |
| eco_67 | E-MEXP-267-raw-data-495080207.txt | 166 | 0.0425471400000 |
| eco_677 | GSM73280 | 166 | 0.0176842700000 |
| eco_686 | GSM83072 | 330 | 0.0152838100000 |
| eco_688 | GSM89487 | 330 | 0.0287173400000 |
| eco_691 | GSM99094 | 166 | 0.0360161100000 |
| eco_693 | GSM99100 | 330 | 0.0291078500000 |
| eco_695 | GSM99115 | 166 | 0.0021312090000 |
| eco_697 | GSM99144 | 330 | 0.0185130800000 |
| eco_7 | 5268 | 330 | 0.0241364500000 |
| eco_703 | GSM99216 | 166 | 0.0000134569300 |
| eco_708 | Clean_ANA9 | 166 | 0.0288330200000 |
| eco_71 | GADXW_exp6 | 330 | 0.0054706910000 |
| eco_714 | EC_LAC_WILD_B | 330 | 0.0390387400000 |
| eco_720 | GSM1369 | 166 | 0.0001289411000 |
| eco_722 | GSM30816 | 330 | 0.0005589814000 |
| eco_729 | GSM65638 | 166 | 0.0464858800000 |
| eco_73 | GSM101232 | 166 | 0.0125967500000 |
| eco_731 | GSM67660 | 166 | 0.0328735100000 |
| eco_738 | GSM82544 | 330 | 0.0045709430000 |
| eco_739 | GSM83079 | 330 | 0.0055722110000 |
| eco_747 | GSM99120 | 166 | 0.0264512500000 |
| eco_748 | GSM99163 | 166 | 0.0042291540000 |
| eco_749 | GSM99165 | 166 | 0.0030341800000 |
| eco_752 | GSM99182 | 330 | 0.0288845000000 |
| eco_752 | GSM99182 | 166 | 0.0353523300000 |
| eco_753 | 5281 | 330 | 0.0363805200000 |
| eco_755 | Clean_DIAUX2 | 330 | 0.0381150600000 |
| eco_758 | EC_GLY_GLYD_44_C | 166 | 0.0206129300000 |
| eco_76 | GSM101236 | 330 | 0.0154004800000 |
| eco_760 | EC_LAC_LD_60_B | 330 | 0.0264048700000 |
| eco_762 | GADXW_exp10 | 166 | 0.0192271700000 |
| eco_763 | GADXW_exp5 | 166 | 0.0007511722000 |
| eco_769 | GSM18282 | 330 | 0.0099866290000 |
| eco_770 | GSM37073 | 166 | 0.0455441600000 |
| eco_780 | GSM99147 | 330 | 0.0235493800000 |
| eco_781 | GSM99185 | 166 | 0.0041637550000 |
| eco_782 | GSM99209 | 330 | 0.0287600400000 |
| eco_79 | GSM101771 | 330 | 0.0393085500000 |
| eco_791 | GSM114383 | 330 | 0.0216635400000 |
| eco_795 | GSM18246 | 330 | 0.0217984900000 |
| eco_797 | GSM73150 | 330 | 0.0300264100000 |
| eco_8 | 5277 | 330 | 0.0217599900000 |
| eco_8 | 5277 | 166 | 0.0081778130000 |
| eco_802 | GSM82620 | 330 | 0.0071646660000 |
| eco_805 | GSM99153 | 166 | 0.0003605643000 |
| eco_81 | GSM101773 | 330 | 0.0322807600000 |
| eco_810 | 5272 | 330 | 0.0207648400000 |
| eco_811 | Clean_DIAUX17 | 330 | 0.0004261815000 |
| eco_812 | EC_GLY_GLYA_44_A | 330 | 0.0272726000000 |
| eco_818 | GSM73129 | 330 | 0.0321014900000 |
| eco_825 | GADXW_exp3 | 166 | 0.0018509040000 |
| eco_826 | GSM106756 | 330 | 0.0311269200000 |
| eco_827 | GSM65591 | 330 | 0.0134222100000 |
| eco_83 | GSM106341 | 330 | 0.0333646300000 |
| eco_832 | GSM99168 | 166 | 0.0142825200000 |
| eco_835 | EC_GLY_GLYB_20_B | 330 | 0.0262145800000 |
| eco_839 | GSM1370 | 166 | 0.0001826618000 |
| eco_84 | GSM106757 | 330 | 0.0378314900000 |
| eco_840 | GSM18272 | 330 | 0.0303332100000 |
| eco_846 | GSM18248 | 330 | 0.0252270700000 |
| eco_85 | GSM106758 | 166 | 0.0326698900000 |
| eco_857 | EC_LAC_LC_60_C | 166 | 0.0243232100000 |
| eco_859 | GSM18280 | 166 | 0.0240683100000 |
| eco_86 | GSM111413 | 330 | 0.0048114200000 |
| eco_863 | GSM73118 | 166 | 0.0012954100000 |
| eco_89 | GSM111420 | 330 | 0.0045544750000 |
| eco_9 | 5287 | 166 | 0.0105262200000 |
| eco_99 | GSM118607 | 330 | 0.0016201080000 |